RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 OR52A5Q9H2C5 316 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 RIMKLBQ9ULI2 386 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 MN1Q10571 1320 aaPredicted RBP13□□□□□ -0.33
VEGFA-219ENST00000518824 EFCAB7A8K855 629 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 IQCF5A8MTL0 148 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CFAP99D6REC4 459 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CAPN5O15484 640 aaPredicted RBP13□□□□□ -0.33
VEGFA-219ENST00000518824 KLK10O43240 276 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 GAS8O95995 478 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 C9P02748 559 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 AMD1P17707 334 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 HALP42357 657 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 MAGEA6P43360 314 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 ABCG1P45844 678 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 ARCN1P48444 511 aaKnown RBP13□□□□□ -0.33
VEGFA-219ENST00000518824 NPY2RP49146 381 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CLN3Q13286 438 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
VEGFA-219ENST00000518824 AFTPHQ6ULP2 937 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 C4orf22Q6V702 233 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CREG2Q8IUH2 290 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 ZNF248Q8NDW4 579 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 PHC3Q8NDX5 983 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 HEXDCQ8WVB3 486 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 KCNE4Q8WWG9 221 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 ART4Q93070 314 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 PPM1MQ96MI6 270 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 FCRL3Q96P31 734 aaPredicted RBP13□□□□□ -0.33
VEGFA-219ENST00000518824 TGM7Q96PF1 710 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CTRCQ99895 268 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CCM2Q9BSQ5 444 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CPNE5Q9HCH3 593 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 ITPR1Q14643 2758 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 PTPRQQ9UMZ3 2332 aa13□□□□□ -0.33
VEGFA-219ENST00000518824 CES2O00748 559 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-219ENST00000518824 RRP8O43159 456 aaKnown RBP12.99□□□□□ -0.33
VEGFA-219ENST00000518824 ZW10O43264 779 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 EFSO43281 561 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.33
VEGFA-219ENST00000518824 NSG1P42857 185 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PTGIRP43119 386 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 SEPHS1P49903 392 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 CSE1LP55060 971 aaKnown RBP12.99□□□□□ -0.33
VEGFA-219ENST00000518824 SH3BP2P78314 561 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PRAMEP78395 509 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.332e-8■□□□□ 9.9
VEGFA-219ENST00000518824 ITIH4Q14624 930 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PAPD7Q5XG87 772 aaKnown RBP12.99□□□□□ -0.33
VEGFA-219ENST00000518824 ANKS6Q68DC2 871 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PACS1Q6VY07 963 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 CERS6Q6ZMG9 384 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 LRRC69Q6ZNQ3 347 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 FAM92BQ6ZTR7 304 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PDZD3Q86UT5 571 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 FAM129CQ86XR2 697 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 KRT222Q8N1A0 295 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 AGBL5Q8NDL9 886 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 C9orf72Q96LT7 481 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 KIFC1Q9BW19 673 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 ACSL5Q9ULC5 683 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 PCDHGA7Q9Y5G6 932 aa12.99□□□□□ -0.33
VEGFA-219ENST00000518824 ZFYVE26Q68DK2 2539 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 NVLO15381 856 aaKnown RBP12.98□□□□□ -0.33
VEGFA-219ENST00000518824 BANF1O75531 89 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 VAPBO95292 243 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 CAPZBP47756 277 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 FNTAP49354 379 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 CDK16Q00536 496 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 FASTKD1Q53R41 847 aaKnown RBP12.98□□□□□ -0.33
VEGFA-219ENST00000518824 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 NLRP9Q7RTR0 991 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 NAT8LQ8N9F0 302 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 AVL9Q8NBF6 648 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 TMEM159Q96B96 161 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SGSM3Q96HU1 749 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SERPINB12Q96P63 405 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-219ENST00000518824 DPYSL5Q9BPU6 564 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 PRORYQ9H606 182 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 CATSPERZQ9NTU4 200 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SIDT1Q9NXL6 827 aaKnown RBP12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SLC39A1Q9NY26 324 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SOX13Q9UN79 622 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
VEGFA-219ENST00000518824 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms