RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 POT1Q9NUX5 634 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 RNF14Q9UBS8 474 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 LOXL2Q9Y4K0 774 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 RPS6KL1Q9Y6S9 549 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 PLXNB3Q9ULL4 1909 aa11.27□□□□□ -0.6
SUB1-213ENST00000515355 ACACBO00763 2458 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 IGLV3-16A0A075B6K0 115 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 IGHV5-10-1A0A0J9YXX1 117 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 IQCF5A8MTL0 148 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 EFCAB8A8MWE9 144 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 F8W8V4 182 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 PLD2O14939 933 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 RASSF9O75901 435 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 URI1O94763 535 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 AP2A2O94973 939 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 MTHFD1P11586 935 aaKnown RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 MLNP12872 115 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 ITIH1P19827 911 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 PDHA2P29803 388 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 CSF2RBP32927 897 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
SUB1-213ENST00000515355 MAGEA6P43360 314 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 LSSP48449 732 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 TTPAP49638 278 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 EIF3BP55884 814 aaKnown RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 CFHR1Q03591 330 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 ACVR1Q04771 509 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 HSPA14Q0VDF9 509 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 PRKG2Q13237 762 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 NR1D2Q14995 579 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 RTP5Q14D33 572 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 ANKRD20A4Q4UJ75 823 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 MRNIPQ6NTE8 343 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 IRGCQ6NXR0 463 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 ZNF574Q6ZN55 896 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 FAM129CQ86XR2 697 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 KRT222Q8N1A0 295 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 PHC3Q8NDX5 983 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 SKA2Q8WVK7 121 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 FAM136AQ96C01 138 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 GRAMD1AQ96CP6 724 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 LINC00615Q96LM1 132 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 RMDN2Q96LZ7 410 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 PWWP2AQ96N64 755 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 FCRL3Q96P31 734 aaPredicted RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 MRM3Q9HC36 420 aaKnown RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
SUB1-213ENST00000515355 SNX24Q9Y343 169 aa11.27□□□□□ -0.61
SUB1-213ENST00000515355 A0A1W2PNU3 283 aaPredicted RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 KLHL33A6NCF5 533 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PRR19A6NJB7 356 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 TAF4O00268 1085 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 QSOX1O00391 747 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PFDN6O15212 129 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 F7P08709 466 aaPredicted RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 PSMA3P25788 255 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 FMO4P31512 558 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 CCKBRP32239 447 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 SEPHS1P49903 392 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 LIMK2P53671 638 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 ITGA8P53708 1063 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 GFERP55789 205 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 C16orf72Q14CZ0 275 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 DNAJC21Q5F1R6 531 aaKnown RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 NEPROQ6NW34 567 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 ARMC6Q6NXE6 501 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 TMEM71Q6P5X7 295 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 FAM92BQ6ZTR7 304 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 SYDE1Q6ZW31 735 aaPredicted RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 PROSER1Q86XN7 944 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 SLITRK4Q8IW52 837 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 LSMEM2Q8N112 164 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 SPATA4Q8NEY3 305 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 OR4E2Q8NGC2 313 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 OR4D9Q8NGE8 314 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 CFAP61Q8NHU2 1237 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 GSDMBQ8TAX9 411 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PEX13Q92968 403 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 TMEM159Q96B96 161 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 STAMBPL1Q96FJ0 436 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 CFAP36Q96G28 342 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PRR11Q96HE9 360 aaPredicted RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 TSSK1BQ9BXA7 367 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 THSD1Q9NS62 852 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 C20orf96Q9NUD7 363 aaPredicted RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 TDRKHQ9Y2W6 561 aaKnown RBP11.26□□□□□ -0.61
SUB1-213ENST00000515355 COLEC10Q9Y6Z7 277 aa11.26□□□□□ -0.61
SUB1-213ENST00000515355 MYLKQ15746 1914 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms