RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PDHA2P29803 388 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 FMO4P31512 558 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 MAPK9P45984 424 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 PREPP48147 710 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 EIF3BP55884 814 aaKnown RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 CTBP1Q13363 440 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CRYMQ14894 314 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 TRADDQ15628 312 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 TYSND1Q2T9J0 566 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CAPRIN2Q6IMN6 1127 aaKnown RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 C8orf74Q6P047 294 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ZNF449Q6P9G9 518 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 TMEM26Q6ZUK4 368 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CENPUQ71F23 418 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 TMPRSS9Q7Z410 1059 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 B3GNT8Q7Z7M8 397 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 PIM3Q86V86 326 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CILP2Q8IUL8 1156 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 OR10G6Q8NH81 332 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 LKAAEAR1Q8TD35 194 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 P2RY12Q9H244 342 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 POT1Q9NUX5 634 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 IMP3Q9NV31 184 aaKnown RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 GRHL1Q9NZI5 618 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ZC3H7BQ9UGR2 993 aaKnown RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ENTPD2Q9Y5L3 495 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 KNTC1P50748 2209 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 CTAGE15A4D2H0 777 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 LIN7AO14910 233 aaPredicted RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 PFDN6O15212 129 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 CPNE6O95741 557 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 S1PR4O95977 384 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 F7P08709 466 aaPredicted RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 CTAGE8P0CG41 777 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 ERVK-10P10266 1014 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 MTHFD1P11586 935 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP46-209ENST00000514536 CCR7P32248 378 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 CSE1LP55060 971 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 CFHR1Q03591 330 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 RPA4Q13156 261 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 BOP1Q14137 746 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 MAP9Q49MG5 647 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 HSP90AA5PQ58FG0 334 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 ZNF789Q5FWF6 425 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 SPANXN3Q5MJ09 141 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 DUS1LQ6P1R4 473 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 CTAGE6Q86UF2 777 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 KCNMB4Q86W47 210 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 CTAGE4Q8IX94 777 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 MMGT1Q8N4V1 131 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 LPGAT1Q92604 370 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 LRRC39Q96DD0 335 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 ATXN7L3BQ96GX2 97 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 WDR83Q9BRX9 315 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 OR52A5Q9H2C5 316 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 UCK1Q9HA47 277 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 EPB41L5Q9HCM4 733 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 IARS2Q9NSE4 1012 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 TEX264Q9Y6I9 313 aa13.64□□□□□ -0.23
USP46-209ENST00000514536 ZFC3H1O60293 1989 aaKnown RBP13.64□□□□□ -0.23
USP46-209ENST00000514536 SLC5A10A0PJK1 596 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 C1QTNF9BB2RNN3 333 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 C1QTNF9P0C862 333 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
USP46-209ENST00000514536 PDX1P52945 283 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 EPHA4P54764 986 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 PLTPP55058 493 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 GPLD1P80108 840 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 SQSTM1Q13501 440 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 GPR18Q14330 331 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 CTSL3PQ5NE16 218 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 UNC5AQ6ZN44 842 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 ZNF574Q6ZN55 896 aaPredicted RBP13.63□□□□□ -0.23
USP46-209ENST00000514536 RBM12BQ8IXT5 1001 aaKnown RBP13.63□□□□□ -0.23
USP46-209ENST00000514536 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
USP46-209ENST00000514536 PHC3Q8NDX5 983 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 FBXO36Q8NEA4 188 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 CALML6Q8TD86 181 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 JPH3Q8WXH2 748 aaPredicted RBP13.63□□□□□ -0.23
USP46-209ENST00000514536 NCSTNQ92542 709 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 GATA6Q92908 595 aa13.63□□□□□ -0.23
USP46-209ENST00000514536 ART4Q93070 314 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms