RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 DNAJC15Q9Y5T4 150 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 LRRC14BA6NHZ5 514 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 NEMP1O14524 444 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 UBDO15205 165 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TAPBPO15533 448 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TSPAN6O43657 245 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TBX10O75333 385 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TM7SF2O76062 418 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 WDR47O94967 919 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ANXA5P08758 320 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 HLA-EP13747 358 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 EZRP15311 586 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 MSH3P20585 1137 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 PGM1P36871 562 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 LTBRP36941 435 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 PRLHRP49683 370 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 HNMTP50135 292 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 AP1S2P56377 157 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 HTR4Q13639 388 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 GRM2Q14416 872 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ACOX1Q15067 660 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 SNCBQ16143 134 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 SMU1Q2TAY7 513 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZNF658BQ4V348 819 aaPredicted RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 XKR7Q5GH72 579 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 PGM2L1Q6PCE3 622 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 GPRIN3Q6ZVF9 776 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 RPS27LQ71UM5 84 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 SPATA19Q7Z5L4 167 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 SYVN1Q86TM6 617 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 DEFB123Q8N688 67 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZNF366Q8N895 744 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 TSPEARQ8WU66 669 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ASZ1Q8WWH4 475 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 FGF14Q92915 247 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 GLMNQ92990 594 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 MCUR1Q96AQ8 359 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 RHBDF1Q96CC6 855 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZNF514Q96K75 400 aaPredicted RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 LINC00615Q96LM1 132 aaPredicted RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 KXD1Q9BQD3 176 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 NTMT1Q9BV86 223 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TRIM54Q9BYV2 358 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 CD244Q9BZW8 370 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZCCHC2Q9C0B9 1178 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZNF576Q9H609 170 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 PARVBQ9HBI1 364 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 DYRK4Q9NR20 520 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 NDE1Q9NXR1 346 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 UTP6Q9NYH9 597 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 CHD7Q9P2D1 2997 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 CD84Q9UIB8 345 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 CDH22Q9UJ99 828 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ZNF225Q9UK10 706 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 ADAMTS6Q9UKP5 1117 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 CNOT6Q9ULM6 557 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 FADS3Q9Y5Q0 445 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 COPG1Q9Y678 874 aaKnown RBP8.22□□□□□ -1.09
RNF4-220ENST00000513578 STON1Q9Y6Q2 735 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 TRPM6Q9BX84 2022 aa8.22□□□□□ -1.09
RNF4-220ENST00000513578 C17orf113A0A1B0GUU1 675 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 A0A1W2PPC1 479 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SLC5A10A0PJK1 596 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SERTM1A2A2V5 107 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 K7EPI3 171 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 PPP6CO00743 305 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 OR7A17O14581 309 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 GIPC1O14908 333 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 VEGFDO43915 354 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SKAP2O75563 359 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 RECQL5O94762 991 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 MATN4O95460 622 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CHEK2O96017 543 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 ADH1BP00325 375 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SOD1P00441 154 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 OTCP00480 354 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 LMNAP02545 664 aaKnown RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 C6P13671 934 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 PCSK2P16519 638 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 LBPP18428 481 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 ITGB6P18564 788 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 C5AR1P21730 350 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CCND1P24385 295 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 AKT1P31749 480 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 KIR2DL1P43626 348 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 AGTR2P50052 363 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 GALK1P51570 392 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 FOXA1P55317 472 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 PLOD1Q02809 727 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 DLX2Q07687 328 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 TMEM115Q12893 351 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms