RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 KIRREL2Q6UWL6 708 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 KRBA2Q6ZNG9 492 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 LRRTM4Q86VH4 590 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 PYROXD2Q8N2H3 581 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 EMC1Q8N766 993 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 C3orf20Q8ND61 904 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 LILRB4Q8NHJ6 448 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 ZFPM2Q8WW38 1151 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 PIH1D2Q8WWB5 315 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 ASB5Q8WWX0 329 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 TMEM158Q8WZ71 300 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 ZNF396Q96N95 335 aaPredicted RBP7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 NUDCD1Q96RS6 583 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 GPATCH1Q9BRR8 931 aaKnown RBP7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 AP1M1Q9BXS5 423 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 SLC39A8Q9C0K1 460 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 OR2AG1Q9H205 316 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 SP110Q9HB58 689 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 PLA2G3Q9NZ20 509 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 IL17CQ9P0M4 197 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 KIAA1468Q9P260 1216 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 CDC23Q9UJX2 597 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 PPT2Q9UMR5 302 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 PCDHA7Q9UN72 937 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 MTMR6Q9Y217 621 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 WDR37Q9Y2I8 494 aa7.46□□□□□ -1.22
DEPDC1B-205ENST00000512078 MPDZO75970 2070 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 GOLGA8SH3BPF8 625 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 SNPHO15079 494 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 ATE1O95260 518 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 MLYCDO95822 493 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 PYGMP11217 842 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CDH3P22223 829 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 IL4RP24394 825 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 KRT9P35527 623 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 HSPA9P38646 679 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 USP8P40818 1118 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 HALP42357 657 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 PMP22Q01453 160 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 IL10RBQ08334 325 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 SLC9A5Q14940 896 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CCDC14Q49A88 953 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 ARMC12Q5T9G4 340 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 C1orf189Q5VU69 101 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 SHEQ5VZ18 495 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 ARMC6Q6NXE6 501 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 NAPRTQ6XQN6 538 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 DOLPP1Q86YN1 238 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 SMYD4Q8IYR2 804 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 NDUFAF2Q8N183 169 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 TAB3Q8N5C8 712 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CPSF7Q8N684 471 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 TMEM35BQ8NCS4 154 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CENPIQ92674 756 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CELF6Q96J87 481 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 FAM81BQ96LP2 452 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 RNF32Q9H0A6 362 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 MRM3Q9HC36 420 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 TRIM39Q9HCM9 518 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 KCNJ16Q9NPI9 418 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 METTL5Q9NRN9 209 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 RASSF1Q9NS23 344 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 POMT2Q9UKY4 750 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 DNPEPQ9ULA0 475 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 LUC7L2Q9Y383 392 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 MRPS2Q9Y399 296 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 AP1M2Q9Y6Q5 423 aa7.45□□□□□ -1.22
DEPDC1B-205ENST00000512078 A0A0J9YYE9 177 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 IDSB3KWA1 339 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 H3BMH7 237 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 KLK8O60259 260 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 GADD45BO75293 160 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 CRLF1O75462 422 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 USP1O94782 785 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 TSPAN12O95859 305 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 TRBC1P01850 177 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 ABOP16442 354 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 CHRNB4P30926 498 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 SDC4P31431 198 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 RFC1P35251 1148 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 PTPN9P43378 593 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 PMS1P54277 932 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 LRRC63Q05C16 580 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 SLC10A7Q0GE19 358 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 LBRQ14739 615 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 FOXD4L6Q3SYB3 417 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 NKAIN1Q4KMZ8 207 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 RALGPS1Q5JS13 557 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 ZNF648Q5T619 568 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 SMYD5Q6GMV2 418 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 FOXD4L3Q6VB84 417 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 SLFN11Q7Z7L1 901 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 ADGRG6Q86SQ4 1221 aa7.44□□□□□ -1.22
DEPDC1B-205ENST00000512078 CDC20BQ86Y33 519 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms