RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 TEX35Q5T0J7 233 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 RARS2Q5T160 578 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 BEND3Q5T5X7 828 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ATL3Q6DD88 541 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 C11orf87Q6NUJ2 197 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 RPUSD3Q6P087 351 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ARMCX5Q6P1M9 558 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 SYT10Q6XYQ8 523 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 IRF2BP2Q7Z5L9 587 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 CCDC190Q86UF4 302 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ERC1Q8IUD2 1116 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 FOXRED2Q8IWF2 684 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 SYT2Q8N9I0 419 aaPredicted RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 CSNK2A3Q8NEV1 391 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 NEK11Q8NG66 645 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 OR1J2Q8NGS2 313 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 TRPC4APQ8TEL6 797 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 MRPS27Q92552 414 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 EXOC4Q96A65 974 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 LRRC59Q96AG4 307 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ORAI1Q96D31 301 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 RADILQ96JH8 1075 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 CNDP2Q96KP4 475 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ZNF778Q96MU6 729 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 LLPHQ9BRT6 129 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 AP1M1Q9BXS5 423 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 NAT10Q9H0A0 1025 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 SIL1Q9H173 461 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 EBF3Q9H4W6 596 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 DNAJC18Q9H819 358 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 YY1AP1Q9H869 796 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 NOX4Q9NPH5 578 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 SLC35C2Q9NQQ7 365 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 TRMT1Q9NXH9 659 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 TAB2Q9NYJ8 693 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 STK39Q9UEW8 545 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 PPIEQ9UNP9 301 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 EXO1Q9UQ84 846 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 ATXN2Q99700 1313 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 SALL1Q9NSC2 1324 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 TJP1Q07157 1748 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 NWD2Q9ULI1 1742 aa3.13□□□□□ -1.91
CALCOCO2-216ENST00000509784 PLEKHG2Q9H7P9 1386 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 RGPD8O14715 1765 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 AFDNP55196 1824 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 ZNF609O15014 1411 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 ANKARQ7Z5J8 1434 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 PXDNQ92626 1479 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 GOLGA6L9A6NEM1 432 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 A6NL46 340 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 EIF4E1BA6NMX2 242 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 SOCS6O14544 535 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MAP2K7O14733 419 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 IKBKBO14920 756 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 SPINT2O43291 252 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 PLPP2O43688 288 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 DKC1O60832 514 aaKnown RBP eCLIP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 RPS6KA5O75582 802 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 RSL1D1O76021 490 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 CRYABP02511 175 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 APOA4P06727 396 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 FBLP22087 321 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 LMO1P25800 156 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 HOXD3P31249 432 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 CASQ1P31415 396 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 NR4A2P43354 598 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 AMTP48728 403 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 LIG4P49917 911 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MMP14P50281 582 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 ZNF81P51508 661 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 EVCP57679 992 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 IRX3P78415 501 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 PPP2R2BQ00005 443 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 FOXM1Q08050 763 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MAD2L1Q13257 205 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 GRAPQ13588 217 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 CTF1Q16619 201 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 CCDC142Q17RM4 750 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 LEXMQ3ZCV2 418 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 AMZ1Q400G9 498 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 DCST1Q5T197 706 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 NSUN5P2Q63ZY6 315 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 ADALQ6DHV7 355 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 WDR73Q6P4I2 378 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 CTR9Q6PD62 1173 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 KCTD18Q6PI47 426 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 TRIM65Q6PJ69 517 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 DLK2Q6UY11 383 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 DENND5BQ6ZUT9 1274 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 ADGRA1Q86SQ6 560 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 EPHX4Q8IUS5 362 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 BEST3Q8N1M1 668 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MINDY1Q8N5J2 469 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 POMGNT2Q8NAT1 580 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MCUQ8NE86 351 aa3.12□□□□□ -1.91
CALCOCO2-216ENST00000509784 MNS1Q8NEH6 495 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms