RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PRAC2D3DTV9 90 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF587BE7ETH6 402 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 H3BQ06 376 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 SOCS6O14544 535 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 MID1O15344 667 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 BCAT2O15382 392 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TPD52L2O43399 206 aaKnown RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 PLRG1O43660 514 aaKnown RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 KRT36O76013 467 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF432O94892 652 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 MBD4O95243 580 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 BAG3O95817 575 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 PDGFBP01127 241 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TFP02787 698 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 PYGLP06737 847 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 CYBAP13498 195 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 PPM1FP49593 454 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 RPP30P78346 268 aaKnown RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 PPIGQ13427 754 aaKnown RBP eCLIP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZRSR2Q15696 482 aaKnown RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 GPR68Q15743 365 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 HIST2H2ACQ16777 129 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 C2orf68Q2NKX9 166 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 BMP2KLQ5H9B9 411 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 C12orf60Q5U649 245 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 HIST2H2BCQ6DN03 193 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZSCAN25Q6NSZ9 544 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 LINGO2Q7L985 606 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 RRM2BQ7LG56 351 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF354CQ86Y25 554 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 FOXP4Q8IVH2 680 aaPredicted RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 CHERPQ8IWX8 916 aaKnown RBP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TEX11Q8IYF3 940 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 CPXCR1Q8N123 301 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 NAGSQ8N159 534 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 BEST2Q8NFU1 509 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 SORCS1Q8WY21 1168 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TKTL2Q9H0I9 626 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 EBF2Q9HAK2 575 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 AATFQ9NY61 560 aaKnown RBP eCLIP4.05□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF224Q9NZL3 707 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 C1RLQ9NZP8 487 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TMOD2Q9NZR1 351 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 MORF4L1Q9UBU8 362 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 MALT1Q9UDY8 824 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 SNX9Q9Y5X1 595 aa4.05□□□□□ -1.76
NFKB1-208ENST00000509165 TEX15Q9BXT5 2789 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 MYO10Q9HD67 2058 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ATXN2Q99700 1313 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 IGKV6D-41A0A0C4DH26 115 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 GPAA1O43292 621 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 PRKAB2O43741 272 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 EIF3JO75822 258 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 CYC1P08574 325 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 F7P08709 466 aaPredicted RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SRCP12931 536 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 CHMLP26374 656 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 STX2P32856 288 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 RGS2P41220 211 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 MAPK9P45984 424 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 TUBP50607 506 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 HYAL1Q12794 435 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 PTP4A2Q12974 167 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 NEDD9Q14511 834 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 TCTN1Q2MV58 587 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 KRTAP24-1Q3LI83 254 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ATP13A5Q4VNC0 1218 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 PLEKHA7Q6IQ23 1121 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 CTR9Q6PD62 1173 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 CPLX2Q6PUV4 134 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ANKRD33Q7Z3H0 272 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 GPR142Q7Z601 462 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF589Q86UQ0 364 aaPredicted RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SATL1Q86VE3 508 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 EXOC3L1Q86VI1 746 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 TDRPQ86YL5 185 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SCYL3Q8IZE3 742 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ZCCHC9Q8N567 271 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF441Q8N8Z8 693 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SPATA20Q8TB22 786 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 NEK9Q8TD19 979 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 MORC4Q8TE76 937 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 TANKQ92844 425 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 C3orf30Q96M34 536 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 KLHL15Q96M94 604 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SEC62Q99442 399 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 CRNKL1Q9BZJ0 848 aaKnown RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 UBTD1Q9HAC8 227 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 WASH6PQ9NQA3 447 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 MPP6Q9NZW5 540 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 PDP2Q9P2J9 529 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SIX4Q9UIU6 781 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 A4GNTQ9UNA3 340 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 FAM96BQ9Y3D0 163 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 COL11A1P12107 1806 aaPredicted RBP4.04□□□□□ -1.76
NFKB1-208ENST00000509165 SPTA1P02549 2419 aa4.04□□□□□ -1.76
NFKB1-208ENST00000509165 LCTP09848 1927 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 CCDC171Q6TFL3 1326 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms