RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 TUBB3Q13509 450 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DNASE1L3Q13609 305 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 IL10RAQ13651 578 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRIM14Q14142 442 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 UBAP2LQ14157 1087 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TFDP2Q14188 446 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 GPR19Q15760 415 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 LACTB2Q53H82 288 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNF789Q5FWF6 425 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TFDP3Q5H9I0 405 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 LDLRAP1Q5SW96 308 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 FNBP1LQ5T0N5 605 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 FAM69BQ5VUD6 431 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 CAPRIN2Q6IMN6 1127 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DENND5AQ6IQ26 1287 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 LCN10Q6JVE6 187 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 CCDC70Q6NSX1 233 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 FBXO38Q6PIJ6 1188 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RANBP10Q6VN20 620 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNF517Q6ZMY9 492 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 BBS12Q6ZW61 710 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DET1Q7L5Y6 550 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 PID1Q7Z2X4 250 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 GLT6D1Q7Z4J2 308 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RASGRP3Q8IV61 690 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RCOR2Q8IZ40 523 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 D2HGDHQ8N465 521 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TC2NQ8N9U0 490 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 IPMKQ8NFU5 416 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 OR4K2Q8NGD2 314 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 GDAP1Q8TB36 358 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNF398Q8TD17 642 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 BRSK1Q8TDC3 778 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 P3H4Q92791 437 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 MIB2Q96AX9 1013 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNF501Q96CX3 271 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RMDN2Q96LZ7 410 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SRPK1Q96SB4 655 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 APOL2Q9BQE5 337 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 EFHD1Q9BUP0 239 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 HEMGNQ9BXL5 484 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 WWP1Q9H0M0 922 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ACTL8Q9H568 366 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 LHX9Q9NQ69 397 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNHIT6Q9NWK9 470 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SMOXQ9NWM0 555 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 HACD3Q9P035 362 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 KLHL8Q9P2G9 620 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SLC24A2Q9UI40 661 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 LNPEPQ9UIQ6 1025 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 TLK1Q9UKI8 766 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 PADI1Q9ULC6 663 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 ARL5AQ9Y689 179 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 CFAP20Q9Y6A4 193 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 CCDC88CQ9P219 2028 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SNRNP200O75643 2136 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 PIPSLA2A3N6 862 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CDC14CA4D256 554 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 OR5K3A6NET4 321 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 MGAT4DA6NG13 374 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 TLCD2A6NGC4 264 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 APOC4-APOC2K7ER74 178 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 SMAPO00193 183 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CCL22O00626 93 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 DDX3YO15523 660 aaKnown RBP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 MTSS1O43312 755 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 KATNA1O75449 491 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 ZRANB2O95218 330 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PRAMEF1O95521 474 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 RECKO95980 971 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 APOC2P02655 101 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 TPM3P06753 285 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CAPN1P07384 714 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PRSS56P0CW18 603 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 VCLP18206 1134 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 HLA-DPA1P20036 260 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PBLDP30039 288 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 MAGEA1P43355 309 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 ARCN1P48444 511 aaKnown RBP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CD97P48960 835 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CDKN1CP49918 316 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 KPNA2P52292 529 aaKnown RBP6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PMS2P54278 862 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 MLLT10P55197 1068 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 KLRB1Q12918 225 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 GPS2Q13227 327 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 SEMA5AQ13591 1074 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 GTF2H3Q13889 308 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PPP2R5EQ16537 467 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 BCL7AQ4VC05 210 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 PRAMEF17Q5VTA0 474 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 CPZQ66K79 652 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 AADACL2Q6P093 401 aa6.27□□□□□ -1.41
HMGN1P16-201ENST00000508308 BZW1Q7L1Q6 419 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms