RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 BAIAP3O94812 1187 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 ZNF883P0CG24 379 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 LIFP15018 202 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 EPHA2P29317 976 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 CASP2P42575 452 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 SUOXP51687 545 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 DRG2P55039 364 aaKnown RBP4.56□□□□□ -1.68
DHFR-204ENST00000508282 IRF3Q14653 427 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 KIAA1644Q3SXP7 199 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 MFSD6Q6ZSS7 791 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 FASTKD5Q7L8L6 764 aaKnown RBP4.56□□□□□ -1.68
DHFR-204ENST00000508282 PLD3Q8IV08 490 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 GPALPP1Q8IXQ4 340 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 ZNF248Q8NDW4 579 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 TBC1D16Q8TBP0 767 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 SLC47A1Q96FL8 570 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 SIX2Q9NPC8 291 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 PCDHGA5Q9Y5G8 931 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 MAGEB17A8MXT2 336 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 NR5A2O00482 541 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 CLIC2O15247 247 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 RSL1D1O76021 490 aaKnown RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 CSPG5O95196 566 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 MAP2K2P36507 400 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 ARF3P61204 181 aaPredicted RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 MRPS5P82675 430 aaKnown RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 ARF1P84077 181 aaKnown RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 KCNC3Q14003 757 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 ALS2CLQ60I27 953 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 KLC3Q6P597 504 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 C1orf122Q6ZSJ8 110 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 MCEMP1Q8IX19 187 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 ZNF843Q8N446 348 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 WDR20Q8TBZ3 569 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 DAZLQ92904 295 aaKnown RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 WBP1Q96G27 269 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 RHNO1Q9BSD3 238 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 C2orf42Q9NWW7 574 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 EXO1Q9UQ84 846 aaKnown RBP4.55□□□□□ -1.68
DHFR-204ENST00000508282 KIF26BQ2KJY2 2108 aa4.55□□□□□ -1.68
DHFR-204ENST00000508282 KAT6BQ8WYB5 2073 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 OR6C76A6NM76 312 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 MITFO75030 526 aaPredicted RBP4.54□□□□□ -1.68
DHFR-204ENST00000508282 H1F0P07305 194 aaKnown RBP4.54□□□□□ -1.68
DHFR-204ENST00000508282 RNF224P0DH78 156 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 ACP2P11117 423 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 PRLRP16471 622 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 CAPN3P20807 821 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 PSMC4P43686 418 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 GEMIN4P57678 1058 aaKnown RBP4.54□□□□□ -1.68
DHFR-204ENST00000508282 SIM2Q14190 667 aaPredicted RBP4.54□□□□□ -1.68
DHFR-204ENST00000508282 GCNT6Q5T4J0 391 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 ADALQ6DHV7 355 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 LRRC59Q96AG4 307 aaKnown RBP4.54□□□□□ -1.68
DHFR-204ENST00000508282 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 COQ3Q9NZJ6 369 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 NPAP1Q9NZP6 1156 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 AMACRQ9UHK6 382 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 KCNJ14Q9UNX9 436 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 KIAA1210Q9ULL0 1709 aa4.54□□□□□ -1.68
DHFR-204ENST00000508282 A0A087X002 238 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 PTGES3LE9PB15 166 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 TO15178 435 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 IGLV1-44P01699 117 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 LDHCP07864 332 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 MMP9P14780 707 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 ITGA3P26006 1051 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 RXRGP48443 463 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
DHFR-204ENST00000508282 AIMP2Q13155 320 aaKnown RBP4.53□□□□□ -1.68
DHFR-204ENST00000508282 ZC2HC1BQ5TFG8 222 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 SH2D5Q6ZV89 423 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 ISCA2Q86U28 154 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 CEP295NLQ96MC4 621 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 ASCL2Q99929 193 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 CHCHD6Q9BRQ6 235 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 ABHD6Q9BV23 337 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 PPIL3Q9H2H8 161 aaKnown RBP4.53□□□□□ -1.68
DHFR-204ENST00000508282 HRH4Q9H3N8 390 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 TAS2R14Q9NYV8 317 aa4.53□□□□□ -1.68
DHFR-204ENST00000508282 STK36Q9NRP7 1315 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 A0A1B0GU03 582 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 PRSS51A0A1B0GVH4 220 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 NADKO95544 446 aaPredicted RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 FRMD6-AS1P0C7T7 363 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 CEACAM1P13688 526 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 ZNF26P17031 533 aaPredicted RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 RPS18P62269 152 aaKnown RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 FAM98BQ52LJ0 330 aaKnown RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 ZNF497Q6ZNH5 498 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 OLIG1Q8TAK6 271 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 TAF15Q92804 592 aaKnown RBP eCLIP4.52□□□□□ -1.69
DHFR-204ENST00000508282 FAM81BQ96LP2 452 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 EGLN1Q9GZT9 426 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 SMARCAD1Q9H4L7 1026 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 HHATLQ9HCP6 504 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 OLFML3Q9NRN5 406 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms