RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 CADM3Q8N126 398 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 OR2T12Q8NG77 320 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 LINGO1Q96FE5 620 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 NODALQ96S42 347 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ZBED2Q9BTP6 218 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 TBCDQ9BTW9 1192 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 HTR3EA5X5Y0 456 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 GNGT2O14610 69 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 GSTA4O15217 222 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 AQP9O43315 295 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 RAMP2O60895 175 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 NDUFS2O75306 463 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 UGT2B4P06133 528 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF140P52738 457 aaPredicted RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 IL10RBQ08334 325 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 SERINC3Q13530 473 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 DNASE1L3Q13609 305 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF235Q14590 738 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 NR6A1Q15406 480 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 DDR2Q16832 855 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 PIANPQ8IYJ0 282 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 METTL6Q8TCB7 284 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ACTR8Q9H981 624 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ATAD3AQ9NVI7 634 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 U3KQV3 271 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ARNTLO00327 626 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 KATNA1O75449 491 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PRKD3O94806 890 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ITIH1P19827 911 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PBX3P40426 434 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 TSPY1Q01534 308 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PTGR1Q14914 329 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ADPRMQ3LIE5 342 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 C1QTNF12Q5T7M4 302 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PSAPL1Q6NUJ1 521 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 TXNDC11Q6PKC3 985 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF548Q8NEK5 533 aaPredicted RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 GPR152Q8TDT2 470 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 FAR1Q8WVX9 515 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PEX13Q92968 403 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 BTN2A3PQ96KV6 586 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 B3GALT6Q96L58 329 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 RDH12Q96NR8 316 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 UGT2B28Q9BY64 529 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 SARS2Q9NP81 518 aaKnown RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 NLE1Q9NVX2 485 aaPredicted RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 GMNNO75496 209 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PFKLP17858 780 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 MAP2K4P45985 399 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 EMX1Q04741 257 aaPredicted RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PTPRRQ15256 657 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 AP5B1Q2VPB7 878 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 SLC39A12Q504Y0 691 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 CTSL3PQ5NE16 218 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 TMEM236Q5W0B7 351 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 TMEM53Q6P2H8 277 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 KLHDC9Q8NEP7 349 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 MDGA1Q8NFP4 955 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 EXOC2Q96KP1 924 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 RPRD1AQ96P16 312 aaPredicted RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 TRIB3Q96RU7 358 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 HERC2P3Q9BVR0 1158 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 GORASP2Q9H8Y8 452 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 FLRT1Q9NZU1 646 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 PMF1-BGLAPU3KQ54 211 aa13.22□□□□□ -0.29
SNCAIP-209ENST00000508017 IGLV3-10A0A075B6K4 115 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 IQCF5A8MTL0 148 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF99A8MXY4 864 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 CNOT3O75175 753 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 GGT5P36269 586 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 DCTP40126 519 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 RGRP47804 291 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 FPGSQ05932 587 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 ABRAXAS2Q15018 415 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms