RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NPIPA1Q9UND3 350 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 WDR37Q9Y2I8 494 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 ZNF835Q9Y2P0 537 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 FHOD1Q9Y613 1164 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 TGP01266 2768 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 FAM237BA0A1B0GVD1 139 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 BECN2A8MW95 431 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 FADS2P1A8MWK0 482 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 H7C1Q1 480 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 DFFAO00273 331 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 PMM2O15305 246 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 SLC25A14O95258 325 aaPredicted RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 CLDN7O95471 211 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 YEATS4O95619 227 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MYL1P05976 194 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MYBL2P10244 700 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 ZNF30P17039 623 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MMP11P24347 488 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MSX1P28360 303 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 HOXC12P31275 282 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 SDC4P31431 198 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 KPNA2P52292 529 aaKnown RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 EPHB1P54762 984 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 TRAF2Q12933 501 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 OLIG2Q13516 323 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 KEAP1Q14145 624 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 RABEP1Q15276 862 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 DEFB113Q30KQ7 82 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 CCDC14Q49A88 953 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 KRTCAP3Q53RY4 240 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 ZNF789Q5FWF6 425 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 ARMC12Q5T9G4 340 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 SCYL2Q6P3W7 929 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 KIRREL2Q6UWL6 708 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 Q6ZPB1 254 aaPredicted RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 SLFN11Q7Z7L1 901 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 DOLPP1Q86YN1 238 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 ZZZ3Q8IYH5 903 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 NDUFAF2Q8N183 169 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 GPR150Q8NGU9 434 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 CCDC110Q8TBZ0 833 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 RXFP2Q8WXD0 754 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 HAS2Q92819 552 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MBD6Q96DN6 1003 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 FAM83DQ9H4H8 585 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 LRRC19Q9H756 370 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 SP110Q9HB58 689 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 NOD2Q9HC29 1040 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 SYTL2Q9HCH5 934 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 NEUROD4Q9HD90 331 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 KIAA1468Q9P260 1216 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 DHCR7Q9UBM7 475 aaKnown RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 PSMD13Q9UNM6 376 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 MRPS2Q9Y399 296 aaKnown RBP6.98□□□□□ -1.29
VCAN-207ENST00000507162 ARID1AO14497 2285 aa6.98□□□□□ -1.29
VCAN-207ENST00000507162 A0A1B0GVL5 298 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 E9PLN8 166 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PRRG2O14669 202 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 P4HA2O15460 535 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 SOCS5O75159 536 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 TOXO94900 526 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PGLSO95336 258 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 TSPAN12O95859 305 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PDHA1P08559 390 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 ALAS2P22557 587 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PRCPP42785 496 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 STC1P52823 247 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 MAXP61244 160 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 NKX6-1P78426 367 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 SLC10A7Q0GE19 358 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 SNTB1Q13884 538 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 GALNT3Q14435 633 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 LBRQ14739 615 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 RPE65Q16518 533 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 RBBP7Q16576 425 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 NKAIN1Q4KMZ8 207 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 FOXD4L5Q5VV16 416 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 ARHGAP36Q6ZRI8 547 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 SHISA6Q6ZSJ9 500 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 C11orf96Q7Z7L8 435 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 ADGRG6Q86SQ4 1221 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 LRRTM4Q86VH4 590 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 CDC20BQ86Y33 519 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 FAM20CQ8IXL6 584 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 CLYBLQ8N0X4 340 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 EID3Q8N140 333 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 CIARTQ8N365 385 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 SIRT6Q8N6T7 355 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 TMEM35BQ8NCS4 154 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 LILRB4Q8NHJ6 448 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 GPT2Q8TD30 523 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 PHF10Q8WUB8 498 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 PIH1D2Q8WWB5 315 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms