RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TOR1AIP1Q5JTV8 583 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 Q5PR19 223 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ETFRF1Q6IPR1 90 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 CASC4Q6P4E1 433 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ENPP7Q6UWV6 458 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 B3GNT6Q6ZMB0 384 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 DEF8Q6ZN54 512 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC16A12Q6ZSM3 486 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF534Q76KX8 674 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCTD9Q7L273 389 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 RABEPKQ7Z6M1 372 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 GPSM1Q86YR5 675 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 LPCAT1Q8NF37 534 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 HEXDCQ8WVB3 486 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEPT1Q8WYJ6 367 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 EEF2KMTQ96G04 330 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 GRAMD2BQ96HH9 432 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PRMT6Q96LA8 375 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 LRFN5Q96NI6 719 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 MUS81Q96NY9 551 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAL3ST4Q96RP7 486 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 FEVQ99581 238 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 GFI1Q99684 422 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 GTPBP2Q9BX10 602 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 MAP6D1Q9H9H5 199 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEBOXQ9HB31 216 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEMA4GQ9NTN9 838 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 RCC2Q9P258 522 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 CDC14AQ9UNH5 594 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 STX8Q9UNK0 236 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 CHKBQ9Y259 395 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PCDHGA1Q9Y5H4 931 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ATXN2Q99700 1313 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 A0A1W2PPQ1 181 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SYCE3A1L190 88 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 GOLGA6L9A6NEM1 432 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 A6NNC1 897 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 B4DGG1 531 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM189-UBE2V1I3L0A0 370 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MEIS2O14770 477 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 XRCC3O43542 346 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PRPSAP2O60256 369 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TLR2O60603 784 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 STAM2O75886 525 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 LUC7L3O95232 432 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PGLSO95336 258 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 VNN2O95498 520 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 OR2T7P0C7T2 308 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CHRNB1P11230 501 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TYMPP19971 482 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CTNNB1P35222 781 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 RASSF2P50749 326 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CTSCP53634 463 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 STARD6P59095 220 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TFF2Q03403 129 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 UBE2V1Q13404 147 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM174BQ3ZCQ3 159 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ALS2CLQ60I27 953 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 WDR73Q6P4I2 378 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ARHGEF25Q86VW2 580 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 DBF4BQ8NFT6 615 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 NSMAFQ92636 917 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MOB3AQ96BX8 217 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SIGLEC11Q96RL6 698 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC22A12Q96S37 553 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CPNE1Q99829 537 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CACNG6Q9BXT2 260 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM234AQ9H0X4 552 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MINDY3Q9H8M7 445 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 C17orf75Q9HAS0 396 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 INTS10Q9NVR2 710 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM161AQ9NX61 479 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MCM9Q9NXL9 1143 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 RNF7Q9UBF6 113 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FBXL5Q9UKA1 691 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 APPL1Q9UKG1 709 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 RAI2Q9Y5P3 530 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ACEP12821 1306 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 A0A0G2JK05 382 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 LINC01548A6NM66 108 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 HEPACAM2A8MVW5 462 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM90A26D6RGX4 464 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MS4A18H0YCH9 400 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ANKRD28O15084 1053 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TO15178 435 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 HSPA12AO43301 675 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ITM2AO43736 263 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZIC3O60481 467 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CRCPO75575 148 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 BCAS2O75934 225 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 IGLV2-14P01704 120 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 INHBAP08476 426 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MYL6BP14649 208 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms