RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 VPS9D1Q9Y2B5 631 aa20.23■□□□□ 0.83
DDR1-255ENST00000504927 ANKRD11Q6UB99 2663 aaPredicted RBP20.23■□□□□ 0.83
DDR1-255ENST00000504927 LAMA5O15230 3695 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 CCDC187A0A096LP49 1063 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 EFCAB8A8MWE9 144 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 TTC4O95801 387 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 MTHFD1P11586 935 aaKnown RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 NDUFS1P28331 727 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 PPM1FP49593 454 aaPredicted RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 LIMK2P53671 638 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 CKAP4Q07065 602 aaKnown RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 CYP4F3Q08477 520 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 TRA2AQ13595 282 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDR1-255ENST00000504927 TUBB2AQ13885 445 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 ST3GAL2Q16842 350 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 NEPROQ6NW34 567 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 XKR5Q6UX68 686 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 B3GNT8Q7Z7M8 397 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 SLITRK4Q8IW52 837 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 LMNTD2Q8IXW0 634 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 OTUD6BQ8N6M0 293 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 ZNF669Q96BR6 464 aaPredicted RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 C12orf66Q96MD2 445 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 FCRL3Q96P31 734 aaPredicted RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 NUDT22Q9BRQ3 303 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 TRIM51Q9BSJ1 452 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 TUBB2BQ9BVA1 445 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 FOXP3Q9BZS1 431 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 EPB41L5Q9HCM4 733 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 AKAP7Q9P0M2 348 aaPredicted RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 FAM8A1Q9UBU6 413 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 PCDHGA8Q9Y5G5 932 aa20.22■□□□□ 0.83
DDR1-255ENST00000504927 COL27A1Q8IZC6 1860 aaPredicted RBP20.22■□□□□ 0.83
DDR1-255ENST00000504927 APC2O95996 2303 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 IFRD1O00458 451 aaPredicted RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 UBXN7O94888 489 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 SEC31AO94979 1220 aaKnown RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 PGAM1P18669 254 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 OGNP20774 298 aaKnown RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 RPS3P23396 243 aaKnown RBP eCLIP20.21■□□□□ 0.833e-6■■■□□ 18.1
DDR1-255ENST00000504927 ITGA8P53708 1063 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 THOC5Q13769 683 aaKnown RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 IGF2-ASQ6U949 168 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 ZNF574Q6ZN55 896 aaPredicted RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 TMPRSS9Q7Z410 1059 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 LDB1Q86U70 411 aaPredicted RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 PLXDC1Q8IUK5 500 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 CALML6Q8TD86 181 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 NCSTNQ92542 709 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 ELMO1Q92556 727 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 CMKLR1Q99788 373 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 EBNA1BP2Q99848 306 aaKnown RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 ERP44Q9BS26 406 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 TBC1D10AQ9BXI6 508 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 OR52A5Q9H2C5 316 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 IMP3Q9NV31 184 aaKnown RBP20.21■□□□□ 0.83
DDR1-255ENST00000504927 PDP2Q9P2J9 529 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 GNPTGQ9UJJ9 305 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 FAM169AQ9Y6X4 670 aa20.21■□□□□ 0.83
DDR1-255ENST00000504927 DSPP15924 2871 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 IGHV5-10-1A0A0J9YXX1 117 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 ZCWPW2A0A1B0GU75 182 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 HGSO14964 777 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 KPNA5O15131 536 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 DXOO77932 396 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 URI1O94763 535 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 HOXB3P14651 431 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 AMD1P17707 334 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 MLLT3P42568 568 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 ADARP55265 1226 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 GABREP78334 506 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 CFHR1Q03591 330 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 DHX9Q08211 1270 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 GPR18Q14330 331 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 KRT33BQ14525 404 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 LONRF1Q17RB8 773 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 TYSND1Q2T9J0 566 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 PHF19Q5T6S3 580 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 PTRHD1Q6GMV3 140 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 KLHL35Q6PF15 583 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 AGGF1Q8N302 714 aaeCLIP20.2■□□□□ 0.82
DDR1-255ENST00000504927 LILRA3Q8N6C8 439 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 SPDYE1Q8NFV5 336 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 GABPB2Q8TAK5 448 aaPredicted RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 ZCCHC14Q8WYQ9 949 aaKnown RBP20.2■□□□□ 0.82
DDR1-255ENST00000504927 LRRC39Q96DD0 335 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 PANX3Q96QZ0 392 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 TRIM31Q9BZY9 425 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 ZMYND15Q9H091 742 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 P2RY12Q9H244 342 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 SEMA6CQ9H3T2 930 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 SATB2Q9UPW6 733 aa20.2■□□□□ 0.82
DDR1-255ENST00000504927 PKD1L2Q7Z442 2459 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 UNC13CQ8NB66 2214 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 GOLGA8KD6RF30 607 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 H3BMM5 538 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 GOLGA8TH3BQL2 631 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 PLD2O14939 933 aa20.19■□□□□ 0.82
DDR1-255ENST00000504927 MPOP05164 745 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms