RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 OR2D3Q8NGH3 330 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 UBTD2Q8WUN7 234 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CENPIQ92674 756 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 ARMC5Q96C12 935 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 WDR41Q9HAD4 459 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 NDUFAF1Q9Y375 327 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 UGT2A1Q9Y4X1 527 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 NEMP2A6NFY4 417 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 C2CD2LO14523 706 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RPA2P15927 270 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 GLRA2P23416 452 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 DTYMKP23919 212 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 ITGB8P26012 769 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CD1BP29016 333 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CD6P30203 668 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 COMPP49747 757 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 BCAMP50895 628 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RPS3AP61247 264 aaKnown RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PCBP1Q15365 356 aaKnown RBP eCLIP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 NRF1Q16656 503 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 HKDC1Q2TB90 917 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 LEXMQ3ZCV2 418 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 COLEC12Q5KU26 742 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 MREGQ8N565 214 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 HCAR2Q8TDS4 363 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 KAT2AQ92830 837 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RTKNQ9BST9 563 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF768Q9H5H4 540 aaKnown RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RHOFQ9HBH0 211 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PARD6AQ9NPB6 346 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PADI2Q9Y2J8 665 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RBM8AQ9Y5S9 174 aaKnown RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 SPHKAPQ2M3C7 1700 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PRAG1Q86YV5 1406 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 BHLHE40O14503 412 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF213O14771 459 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 AP5Z1O43299 807 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 ADAM23O75077 832 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 RFPL2O75678 378 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 TPOP07202 933 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 IFNAR1P17181 557 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PTAFRP25105 342 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 YWHAQP27348 245 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 SSTR2P30874 369 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 GRK6P43250 576 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CDH4P55283 916 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 UBE2IP63279 158 aaKnown RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 BNIP3Q12983 259 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 IKBKEQ14164 716 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 KRT33BQ14525 404 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 FAM98CQ17RN3 349 aaKnown RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 SPDYE7PQ495Y7 208 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 KIAA0319Q5VV43 1072 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 C6orf15Q6UXA7 325 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CLEC9AQ6UXN8 241 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 TSPYL6Q8N831 410 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 TNFAIP8L1Q8WVP5 186 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 CPNE4Q96A23 557 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 MTG1Q9BT17 334 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 HOXD1Q9GZZ0 328 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 SPATA6Q9NWH7 488 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 GCNT4Q9P109 453 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 GDF2Q9UK05 429 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-204ENST00000504131 STXBP5LQ9Y2K9 1186 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 SLC22A7Q9Y694 548 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 MYO3AQ8NEV4 1616 aa6.18□□□□□ -1.42
CLCN3-204ENST00000504131 TRBV23-1A0A0A0MS06 115 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 BCAS1O75363 584 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ANXA1P04083 346 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NAGAP17050 411 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NHSL2Q5HYW2 709 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ASB18Q6ZVZ8 466 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FAM122BQ7Z309 247 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 RAB44Q7Z6P3 723 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CCDC117Q8IWD4 279 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 STK40Q8N2I9 435 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZCCHC14Q8WYQ9 949 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 COPS5Q92905 334 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NTAN1Q96AB6 310 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SAT2Q96F10 170 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FMO2Q99518 471 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SPXQ9BT56 116 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF219Q9P2Y4 722 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DNAJB9Q9UBS3 223 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FBXW2Q9UKT8 454 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 RNF215Q9Y6U7 377 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HSD3B1P14060 373 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TFAMQ00059 246 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SNTA1Q13424 505 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SCARB2Q14108 478 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CBX2Q14781 532 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZBED5Q49AG3 693 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 EARS2Q5JPH6 523 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 AVPI1Q5T686 147 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FAM83HQ6ZRV2 1179 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms