RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 OVGP1Q12889 678 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PRKG1Q13976 671 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CDK10Q15131 360 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CHI3L2Q15782 390 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HIST2H2ACQ16777 129 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FAM76BQ5HYJ3 339 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 WDR44Q5JSH3 913 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 AGAP9Q5VTM2 703 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GPR107Q5VW38 600 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LPCAT4Q643R3 524 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC8EQ6NSJ5 796 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 STK32CQ86UX6 486 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 P2RY8Q86VZ1 359 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CMTR2Q8IYT2 770 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PPM1NQ8N819 430 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FAM71DQ8N9W8 422 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FBXL13Q8NEE6 735 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PPP1R2P1Q96PQ5 205 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM121Q9BTD3 319 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NUP85Q9BW27 656 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 APOL5Q9BWW9 433 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 THAP2Q9H0W7 228 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NXF3Q9H4D5 531 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CCM2LQ9NUG4 571 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZC3H7BQ9UGR2 993 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CYB5R1Q9UHQ9 305 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ACSL5Q9ULC5 683 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DHRS12A0PJE2 317 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HMX3A6NHT5 357 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PROB1E7EW31 1015 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZBTB39O15060 712 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 EFCAB14O75071 495 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CDH1P12830 882 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HSD17B1P14061 328 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RRM1P23921 792 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 KRT20P35900 424 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RPS9P46781 194 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ARHGDIAP52565 204 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PSMC6P62333 389 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLC25A3Q00325 362 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SF3A3Q12874 501 aaKnown RBP eCLIP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MRPL28Q13084 256 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CCNIQ14094 377 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 VGLL4Q14135 290 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GRB7Q14451 532 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZXDCQ2QGD7 858 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MGAT5BQ3V5L5 792 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 C16orf59Q7L2K0 433 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ANKRD46Q86W74 232 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LIX1LQ8IVB5 337 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GDPD1Q8N9F7 314 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TXNDC5Q8NBS9 432 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HIPK4Q8NE63 616 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF555Q8NEP9 628 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 OR2T34Q8NGX1 318 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 OR2T3Q8NH03 318 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CYP2W1Q8TAV3 490 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CLDN23Q96B33 292 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZFYVE19Q96K21 471 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SAMD11Q96NU1 681 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NODALQ96S42 347 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC106Q9BWC9 280 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLC13A1Q9BZW2 595 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CDT1Q9H211 546 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CD93Q9NPY3 652 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ARHGEF4Q9NR80 690 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 BFARQ9NZS9 450 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ACTR3BQ9P1U1 418 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ARMCX1Q9P291 453 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 IFT80Q9P2H3 777 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 REV1Q9UBZ9 1251 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PTPN22Q9Y2R2 807 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MAGED1Q9Y5V3 778 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DLGAP3O95886 979 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NPPAP01160 153 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 S100A8P05109 93 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PEPDP12955 493 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MTHFD2P13995 350 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RPS2P15880 293 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NCF2P19878 526 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 EFNA1P20827 205 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 BGNP21810 368 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TGM1P22735 817 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 XPAP23025 273 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SOX6P35712 828 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CHKAP35790 457 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ETV6P41212 452 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CBX5P45973 191 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RXRGP48443 463 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FLI1Q01543 452 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HSF2Q03933 536 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PDE7AQ13946 482 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 POU6F1Q14863 301 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DDR2Q16832 855 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC157Q569K6 752 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TFDP3Q5H9I0 405 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NHSL2Q5HYW2 709 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FGD3Q5JSP0 725 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FAM209AQ5JX71 171 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PDE12Q6L8Q7 609 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms