RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 PLCL1Q15111 1095 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 PPP2R5EQ16537 467 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 ATP13A5Q4VNC0 1218 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 TMTC4Q5T4D3 741 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 ATP1A1-AS1Q5TC04 95 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 ARMC6Q6NXE6 501 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 ZNF547Q8IVP9 402 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 APLFQ8IW19 511 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 RHOT1Q8IXI2 618 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 OR8K5Q8NH50 307 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 TFB1MQ8WVM0 346 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 RSC1A1Q92681 617 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 TADA1Q96BN2 335 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 TEKT5Q96M29 485 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 OLFM3Q96PB7 478 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 VAT1Q99536 393 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 CEP41Q9BYV8 373 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 NEUROD4Q9HD90 331 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 LHX9Q9NQ69 397 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 IFNKQ9P0W0 207 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 SEMA5BQ9P283 1151 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 NENFQ9UMX5 172 aa10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 G3BP2Q9UN86 482 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-211ENST00000502404 DOPEY2Q9Y3R5 2298 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 CYSRT1A8MQ03 144 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 KIF1CO43896 1103 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 VPS4BO75351 444 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 POP7O75817 140 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 MT-CYBP00156 380 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 SPAM1P38567 509 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 HSD11B2P80365 405 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 DMPKQ09013 629 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 XRCC4Q13426 336 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 LONRF2Q1L5Z9 754 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 CPNE8Q86YQ8 564 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 CARFQ8N187 725 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 SLC41A2Q96JW4 573 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 FERMT1Q9BQL6 677 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 BPIFA1Q9NP55 256 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 IL26Q9NPH9 171 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 TLK1Q9UKI8 766 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 VPS4AQ9UN37 437 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 FLNCQ14315 2725 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
UBE2D3-211ENST00000502404 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 LOC285095A0A1B0GVY8 99 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 SYCE3A1L190 88 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 C3orf70A6NLC5 250 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 SPOPO43791 374 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 KLK3P07288 261 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 HLA-DPA1P20036 260 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 MSH3P20585 1137 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PTPN3P26045 913 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PTPN4P29074 926 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 CD97P48960 835 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PGDP52209 483 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 WNT3AP56704 352 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 DYNLT1P63172 113 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 KRT33BQ14525 404 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 RPE65Q16518 533 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 GLT6D1Q7Z4J2 308 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 C11orf96Q7Z7L8 435 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 SYVN1Q86TM6 617 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 OOSP2Q86WS3 158 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 CT55Q8WUE5 264 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 P3H4Q92791 437 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 MIB2Q96AX9 1013 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PACSIN1Q9BY11 444 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 ACTL8Q9H568 366 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 FANCEQ9HB96 536 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 FGF21Q9NSA1 209 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 HRASLS2Q9NWW9 162 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 TRHDEQ9UKU6 1024 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 PLAAQ9Y263 795 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 SPO11Q9Y5K1 396 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 HEBP2Q9Y5Z4 205 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 COLEC10Q9Y6Z7 277 aa10.88□□□□□ -0.67
UBE2D3-211ENST00000502404 RP1L1Q8IWN7 2480 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-211ENST00000502404 IGHV5-51A0A0C4DH38 117 aa10.87□□□□□ -0.67
UBE2D3-211ENST00000502404 CLEC18AA5D8T8 446 aa10.87□□□□□ -0.67
UBE2D3-211ENST00000502404 AURKAO14965 403 aa10.87□□□□□ -0.67
UBE2D3-211ENST00000502404 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms