RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PSMD13Q9UNM6 376 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 MED16Q9Y2X0 877 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 COL5A1P20908 1838 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 IQANK1A0A1B0GTG1 560 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 TPP1O14773 563 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 LIN7AO14910 233 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-227ENST00000498056 DFNA5O60443 496 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 DGKAP23743 735 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
CPNE1-227ENST00000498056 AOAHP28039 575 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 CLCN7P51798 805 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 TAS2R39P59534 338 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 POU4F1Q01851 419 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 DMPKQ09013 629 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 BNIP3Q12983 259 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 SHBQ15464 509 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 DEFB133Q30KQ1 61 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 TAF1BQ53T94 588 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-227ENST00000498056 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 GKN2Q86XP6 184 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 CEP97Q8IW35 865 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 GPAMQ9HCL2 828 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 PARD6AQ9NPB6 346 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 SNX15Q9NRS6 342 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 SIRPGQ9P1W8 387 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
CPNE1-227ENST00000498056 DNMT3AQ9Y6K1 912 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-227ENST00000498056 FRYLO94915 3013 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 KLHL33A6NCF5 533 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 KPNA5O15131 536 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 LRP3O75074 770 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 ANXA6P08133 673 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 SNRPAP09012 282 aaKnown RBP13.3□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF37AP17032 561 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-227ENST00000498056 KRT15P19012 456 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 IDSP22304 550 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 RXRGP48443 463 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 RAB10P61026 200 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 CSRP2Q16527 193 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 ACSBG2Q5FVE4 666 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 HDXQ7Z353 690 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 NRROSQ86YC3 692 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-227ENST00000498056 GPBAR1Q8TDU6 330 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 ASZ1Q8WWH4 475 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 MTBPQ96DY7 904 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 WWP1Q9H0M0 922 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 DPEP2Q9H4A9 486 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 PCMTD2Q9NV79 361 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 TAAR2Q9P1P5 351 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 GULP1Q9UBP9 304 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 VWA7Q9Y334 891 aa13.3□□□□□ -0.28
CPNE1-227ENST00000498056 HMX2A2RU54 273 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 GOLGA6L10A6NI86 522 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 PROB1E7EW31 1015 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 SNRNP200O75643 2136 aaKnown RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TCEA3O75764 348 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TYK2P29597 1187 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 HALP42357 657 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 RGS4P49798 205 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 CLCNKAP51800 687 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TIAL1Q01085 375 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ZKSCAN8Q15776 578 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF658BQ4V348 819 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 DUS1LQ6P1R4 473 aaKnown RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 XKR5Q6UX68 686 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 PDZD3Q86UT5 571 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 VRK3Q8IV63 474 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 MYO1HQ8N1T3 1032 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 FAM46DQ8NEK8 389 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ZDHHC1Q8WTX9 485 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 INPP5DQ92835 1189 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 RMDN2Q96LZ7 410 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ROPN1BQ9BZX4 212 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 VPS11Q9H270 941 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 ROPN1Q9HAT0 212 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 POPDC3Q9HBV1 291 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 PRDM8Q9NQV8 689 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 IMP3Q9NV31 184 aaKnown RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 TBC1D29Q9UFV1 150 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 RUVBL2Q9Y230 463 aaKnown RBP13.29□□□□□ -0.28
CPNE1-227ENST00000498056 DHRS7Q9Y394 339 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 NFS1Q9Y697 457 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
CPNE1-227ENST00000498056 SLC5A10A0PJK1 596 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms