RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PNPLA6Q8IY17 1366 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 C5P01031 1676 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 LTBP4Q8N2S1 1624 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ZCWPW2A0A1B0GU75 182 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 FRMD3A2A2Y4 597 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 A8MZ25 164 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 H3BQ06 376 aaPredicted RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 P2RY10O00398 339 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 MAP2K7O14733 419 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 FGF17O60258 216 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 GPC4O75487 556 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 BAIAP3O94812 1187 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 KCNK5O95279 499 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ZNF853P0CG23 659 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ACTN1P12814 892 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ZNF23P17027 643 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ACADLP28330 430 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 HOXA1P49639 335 aaPredicted RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 MMP14P50281 582 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ARF3P61204 181 aaPredicted RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 PHEXP78562 749 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 COG7P83436 770 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ARF1P84077 181 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 PLIN5Q00G26 463 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SREBF2Q12772 1141 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 GAGE5Q13069 117 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 GAGE6Q13070 117 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 RBBP5Q15291 538 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 PCGF3Q3KNV8 242 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 PDSS1Q5T2R2 415 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 STXBP5Q5T5C0 1151 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 PMS2CLQ68D20 193 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 JADE1Q6IE81 842 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 OR7E24Q6IFN5 339 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 FAM171BQ6P995 826 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 KCTD8Q6ZWB6 473 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 PLEKHM3Q6ZWE6 761 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TRMT1LQ7Z2T5 733 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 TBC1D1Q86TI0 1168 aaPredicted RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 CCDC190Q86UF4 302 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 NFE4Q86UQ8 179 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TEX11Q8IYF3 940 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TMTC2Q8N394 836 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 EMC1Q8N766 993 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 ANKRD52Q8NB46 1076 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TRPC4APQ8TEL6 797 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SCFD2Q8WU76 684 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TMEM255BQ8WV15 326 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SLC44A1Q8WWI5 657 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SKA1Q96BD8 255 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SEMA3CQ99985 751 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 POLR3CQ9BUI4 534 aaPredicted RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 TRMT61BQ9BVS5 477 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 LRMDAQ9H2I8 198 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 EIF2B3Q9NR50 452 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 ZFP57Q9NU63 452 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TCP11L1Q9NUJ3 509 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 POLG2Q9UHN1 485 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SESN1Q9Y6P5 492 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 NFAT5O94916 1531 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 CRB1P82279 1406 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 COL4A1P02462 1669 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 FAM208AQ9UK61 1670 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 KIAA0232Q92628 1395 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 PHRF1Q9P1Y6 1649 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 ADGRB2O60241 1585 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 MEGF6O75095 1541 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 A0A087WYN8 130 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 A0A1W2PP11 408 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 CTAGE9A4FU28 777 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 OR5K3A6NET4 321 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 DVL1O14640 695 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 SMAD9O15198 467 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 EIF3DO15371 548 aaKnown RBP eCLIP2.75□□□□□ -1.97
RIF1-212ENST00000498041 OGG1O15527 345 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 LINC01565O15544 149 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 BUD23O43709 281 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 HS6ST1O60243 411 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 SRPRAP08240 638 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 CTAGE8P0CG41 777 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 EIF2S2P20042 333 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 ANXA7P20073 488 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 ANOS1P23352 680 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 MARK3P27448 753 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 HOXA13P31271 388 aaPredicted RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 RXRGP48443 463 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 ARCN1P48444 511 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 GPR143P51810 404 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 DVL1P1P54792 670 aaPredicted RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 RUNX1T1Q06455 604 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 ZNF628Q5EBL2 1059 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 SIRPB2Q5JXA9 342 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 C19orf48Q6RUI8 117 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 ZNF852Q6ZMS4 543 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 MEX3BQ6ZN04 569 aaKnown RBP2.75□□□□□ -1.97
RIF1-212ENST00000498041 C1orf122Q6ZSJ8 110 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 ATG9AQ7Z3C6 839 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 ZNF329Q86UD4 541 aa2.75□□□□□ -1.97
RIF1-212ENST00000498041 CTAGE4Q8IX94 777 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms