RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 UBTD1Q9HAC8 227 aa3.89□□□□□ -1.79
SMC4-225ENST00000497203 EQTNQ9NQ60 294 aa3.89□□□□□ -1.79
SMC4-225ENST00000497203 TCP11L1Q9NUJ3 509 aa3.89□□□□□ -1.79
SMC4-225ENST00000497203 PDS5AQ29RF7 1337 aaKnown RBP3.89□□□□□ -1.79
SMC4-225ENST00000497203 A0A0G2JPF8 293 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 HNRNPCL3B7ZW38 293 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 TO15178 435 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 ZNHIT1O43257 154 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 MED24O75448 989 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 CAMTA2O94983 1202 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 PAPSS2O95340 614 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 LDLRP01130 860 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 RPN1P04843 607 aaKnown RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 FAM106CPP0CH98 169 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 HNRNPCL4P0DMR1 293 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 FDPSP14324 419 aaKnown RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 ZNF12P17014 697 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 MTHFRP42898 656 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 MLLT10P55197 1068 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 IRX6P78412 446 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 PLA2G7Q13093 441 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 GTF2H2Q13888 395 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 KEAP1Q14145 624 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 GCNT6Q5T4J0 391 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 GTF2H2CQ6P1K8 395 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 FIGLAQ6QHK4 219 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 GALNTL5Q7Z4T8 443 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 CENPVQ7Z7K6 275 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 SFR1Q86XK3 245 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 KMT5CQ86Y97 462 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 MFN1Q8IWA4 741 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 PI4KAP1Q8N8J0 262 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 PPFIBP2Q8ND30 876 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 OR52I2Q8NH67 350 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 SPATA22Q8NHS9 363 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 SMPDL3BQ92485 455 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 FIG4Q92562 907 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 SECISBP2LQ93073 1101 aaKnown RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 BICD1Q96G01 975 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 ADGRG7Q96K78 797 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 FAM84BQ96KN1 310 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 PRMT6Q96LA8 375 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 CTAGE1Q96RT6 745 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 PCYT2Q99447 389 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 EGFL8Q99944 293 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 SYT17Q9BSW7 474 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 IL25Q9H293 177 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 OPA3Q9H6K4 179 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 FKRPQ9H9S5 495 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 CD93Q9NPY3 652 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 DPP3Q9NY33 737 aa3.88□□□□□ -1.79
SMC4-225ENST00000497203 NOL7Q9UMY1 257 aaKnown RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 TRIP12Q14669 1992 aaPredicted RBP3.88□□□□□ -1.79
SMC4-225ENST00000497203 A0A0B4J293 547 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 ZCWPW2A0A1B0GU75 182 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 MAGEA13PA6NCF6 341 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 GPR137BO60478 399 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 BMP10O95393 424 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 MYOD1P15172 320 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 EEF1B2P24534 225 aaKnown RBP3.87□□□□□ -1.79
SMC4-225ENST00000497203 DNASE1P24855 282 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 PTAFRP25105 342 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 GABRA5P31644 462 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 IL15P40933 162 aaPredicted RBP3.87□□□□□ -1.79
SMC4-225ENST00000497203 SLC9A3P48764 834 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SLC20A2Q08357 652 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SNTA1Q13424 505 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 ASIC2Q16515 512 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 ALDH1L2Q3SY69 923 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 HECTD3Q5T447 861 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 PLA2G4FQ68DD2 849 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 NADSYN1Q6IA69 706 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 FAM198BQ6UWH4 519 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 ADCK2Q7Z695 626 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 TMPRSS12Q86WS5 348 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 METTL23Q86XA0 190 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 BBS10Q8TAM1 723 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SETD6Q8TBK2 473 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SLC20A1Q8WUM9 679 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 NXNL1Q96CM4 212 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SIPA1Q96FS4 1042 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 ANKRD2Q9GZV1 360 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 SEMA6AQ9H2E6 1030 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 CNOT10Q9H9A5 744 aaKnown RBP3.87□□□□□ -1.79
SMC4-225ENST00000497203 KLHL9Q9P2J3 617 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 POU2F3Q9UKI9 436 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 PROCRQ9UNN8 238 aa3.87□□□□□ -1.79
SMC4-225ENST00000497203 MED19A0JLT2 244 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 ANKUB1A6NFN9 424 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 HEPACAM2A8MVW5 462 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 HNRNPCL2B2RXH8 293 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 WDR46O15213 610 aaKnown RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 EIF3DO15371 548 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMC4-225ENST00000497203 XRCC3O43542 346 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 DIAPH2O60879 1101 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 WDR1O75083 606 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 C22orf31O95567 290 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 OR2T7P0C7T2 308 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 DANCRP0C864 163 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms