RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 FOXM1Q08050 763 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 CDH17Q12864 832 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 SEMA3AQ14563 771 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 KCNAB1Q14722 419 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 BRD3Q15059 726 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF658BQ4V348 819 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-246ENST00000496569 TMEM164Q5U3C3 297 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 TIPARPQ7Z3E1 657 aaKnown RBP11.93□□□□□ -0.5
HDLBP-246ENST00000496569 LDB1Q86U70 411 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-246ENST00000496569 PLXDC1Q8IUK5 500 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 UNC5BQ8IZJ1 945 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 TRIM58Q8NG06 486 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 HM13Q8TCT9 377 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 LKAAEAR1Q8TD35 194 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 TTC9Q92623 222 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 NKD1Q969G9 470 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 HDAC10Q969S8 669 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 LRRC45Q96CN5 670 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 KCNF1Q9H3M0 494 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 COG4Q9H9E3 785 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-246ENST00000496569 PCDHGA3Q9Y5H0 932 aa11.93□□□□□ -0.5
HDLBP-246ENST00000496569 DNMT3AQ9Y6K1 912 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-246ENST00000496569 SEC16AO15027 2179 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 IGHV5-51A0A0C4DH38 117 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 STMND1H3BQB6 276 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 ATXN7O15265 892 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 OR1I1O60431 355 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 SUN1O94901 812 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 RALBP11234 206 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 LIFP15018 202 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 STIP1P31948 543 aaKnown RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 CSE1LP55060 971 aaKnown RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 CACNG1Q06432 222 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 GSE1Q14687 1217 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 CCNG2Q16589 344 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 DCAF12Q5T6F0 453 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 CACHD1Q5VU97 1274 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 TTC27Q6P3X3 843 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 CES3Q6UWW8 571 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 LINC00523Q86TU6 105 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 PRELID2Q8N945 189 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 AVL9Q8NBF6 648 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 PHC3Q8NDX5 983 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF514Q96K75 400 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 LINC00615Q96LM1 132 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 OR6C1Q96RD1 312 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 MAP3K3Q99759 626 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 HGH1Q9BTY7 390 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 DDA1Q9BW61 102 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 FRMD8P1Q9BZ68 369 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 EPB41L1Q9H4G0 881 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 PAK5Q9P286 719 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 MARCH4Q9P2E8 410 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 PCDHGA4Q9Y5G9 962 aa11.92□□□□□ -0.5
HDLBP-246ENST00000496569 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF462Q96JM2 2506 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 LOC101059948A0A1B0GTJ6 334 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 OR6C74A6NCV1 312 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 KCNJ13O60928 360 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 STK17BO94768 372 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 TIAF1O95411 115 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 F7P08709 466 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 CAPRIN2Q6IMN6 1127 aaKnown RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 GSTA5Q7RTV2 222 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 REXO1L1PQ8IX06 675 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 CACNA2D3Q8IZS8 1091 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 IL22RA1Q8N6P7 574 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 EXTL1Q92935 676 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 AP1M1Q9BXS5 423 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 OR52A5Q9H2C5 316 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 ZNF768Q9H5H4 540 aaKnown RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 XKR8Q9H6D3 395 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
HDLBP-246ENST00000496569 SLC24A2Q9UI40 661 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 PILRAQ9UKJ1 303 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 PCDHB11Q9Y5F2 797 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 ANKRD12Q6UB98 2062 aa11.91□□□□□ -0.5
HDLBP-246ENST00000496569 BSNQ9UPA5 3926 aa11.9□□□□□ -0.5
HDLBP-246ENST00000496569 HEATR9A2RTY3 570 aa11.9□□□□□ -0.5
HDLBP-246ENST00000496569 OR5K3A6NET4 321 aa11.9□□□□□ -0.5
HDLBP-246ENST00000496569 EIF4E1BA6NMX2 242 aaKnown RBP11.9□□□□□ -0.5
HDLBP-246ENST00000496569 ERI2A8K979 691 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms