RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 ISL1P61371 349 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 TUBB4BP68371 445 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 PPP2R5CQ13362 524 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 NR1D2Q14995 579 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 GAGE2EQ4V326 116 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-218ENST00000494934 XKR9Q5GH70 373 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 GAGE2AQ6NT46 116 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 C8orf82Q6P1X6 216 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-218ENST00000494934 FJX1Q86VR8 437 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 MFN1Q8IWA4 741 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 MAML2Q8IZL2 1156 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-218ENST00000494934 C1orf87Q8N0U7 546 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 NUP93Q8N1F7 819 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 PELI3Q8N2H9 469 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 EXD1Q8NHP7 514 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 OCC1Q8TAD7 63 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 SMPDL3BQ92485 455 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 OTUB1Q96FW1 271 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-218ENST00000494934 SCMH1Q96GD3 660 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 C3orf30Q96M34 536 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 QRFPRQ96P65 431 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 HHATLQ9HCP6 504 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 DDX43Q9NXZ2 648 aaKnown RBP5.18□□□□□ -1.58
SRRM1-218ENST00000494934 NPAP1Q9NZP6 1156 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 GAGE2DQ9UEU5 116 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 SMCHD1A6NHR9 2005 aa5.18□□□□□ -1.58
SRRM1-218ENST00000494934 A0A087WV48 116 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 A0A1W2PPQ1 181 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 OR5K3A6NET4 321 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PSMD14O00487 310 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 MEIS2O14770 477 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 GOSR1O95249 250 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 SIX3O95343 332 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 RAB40ALP0C0E4 278 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 OR2T7P0C7T2 308 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 LINC00271P0C7V0 271 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 TGFB3P10600 412 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 CD22P20273 847 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 HOXD3P31249 432 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 MTHFRP42898 656 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 LIMK1P53667 647 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 SCN1BQ07699 218 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PRKAA1Q13131 559 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 NFATC4Q14934 902 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 RRS1Q15050 365 aaKnown RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 TYSND1Q2T9J0 566 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 TDRD12Q587J7 1177 aaKnown RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 NHSL2Q5HYW2 709 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 C6orf136Q5SQH8 315 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 CCNI2Q6ZMN8 369 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 TMPRSS11FQ6ZWK6 438 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 DGLUCYQ7Z3D6 616 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 ABI3BPQ7Z7G0 1075 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 DSG4Q86SJ6 1040 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 TMPRSS12Q86WS5 348 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 FAM114A1Q8IWE2 563 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 SIX6OS1Q8N1H7 587 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 CARNMT1Q8N4J0 409 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 ANKRD13CQ8N6S4 541 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PAPD5Q8NDF8 572 aaKnown RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 SLC20A1Q8WUM9 679 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PTP4A1Q93096 173 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 ABTB1Q969K4 478 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PIGTQ969N2 578 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 RMDN2Q96LZ7 410 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 CPNE1Q99829 537 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 FERMT1Q9BQL6 677 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 WNT5BQ9H1J7 359 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 COPS7BQ9H9Q2 264 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 Q9N2K0 584 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 KCNS2Q9ULS6 477 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 OR2W1Q9Y3N9 320 aa5.17□□□□□ -1.58
SRRM1-218ENST00000494934 PDS5AQ29RF7 1337 aaKnown RBP5.17□□□□□ -1.58
SRRM1-218ENST00000494934 C5orf60A6NFR6 353 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 SRRM3A6NNA2 597 aaPredicted RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 INO80B-WBP1J3KQ70 363 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 DNM1LO00429 736 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 WDR46O15213 610 aaKnown RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 FMO6PO60774 539 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 ITGA2P17301 1181 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 PCYT1AP49585 367 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 TPD52P55327 224 aaPredicted RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 PDE1BQ01064 536 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 SLC20A2Q08357 652 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 ZNF155Q12901 538 aaPredicted RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 GCNT6Q5T4J0 391 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 GRTP1Q5TC63 336 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 FAM109BQ6ICB4 259 aaPredicted RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 TMPRSS11BQ86T26 416 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 TLK2Q86UE8 772 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 PIM3Q86V86 326 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 ZNF114Q8NC26 417 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 DNAAF4Q8WXU2 420 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 TANKQ92844 425 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 SLAMF9Q96A28 289 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 FAM84BQ96KN1 310 aaPredicted RBP5.16□□□□□ -1.58
SRRM1-218ENST00000494934 TMEM79Q9BSE2 394 aa5.16□□□□□ -1.58
SRRM1-218ENST00000494934 CSTL1Q9H114 145 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms