RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MIF4GDA9UHW6 222 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 J3QKU1 62 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 TOX3O15405 576 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 SLC28A2O43868 658 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 KATNA1O75449 491 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 DLGAP3O95886 979 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 RALBP11234 206 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 MTHFD1P11586 935 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 ATP1B2P14415 290 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 FOLR1P15328 257 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ITGALP20701 1170 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 DLSTP36957 453 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 HADHAP40939 763 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ARL4DP49703 201 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 PDE1BQ01064 536 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ABHD18Q0P651 414 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 KLF1Q13351 362 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 DSG2Q14126 1118 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SEPT6Q14141 434 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ATP1A1-AS1Q5TC04 95 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 KCTD11Q693B1 232 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 CAPRIN2Q6IMN6 1127 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 XKR5Q6UX68 686 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 C6orf15Q6UXA7 325 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 PRUNE1Q86TP1 453 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SERPINA9Q86WD7 417 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 PTRH1Q86Y79 214 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 NXPE1Q8N323 547 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 CLDN19Q8N6F1 224 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 OR4E2Q8NGC2 313 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 OR52K1Q8NGK4 314 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ATG4AQ8WYN0 398 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 KIAA1143Q96AT1 154 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 LRRC45Q96CN5 670 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 CDKN2AIPNLQ96HQ2 116 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 HES6Q96HZ4 224 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SLC45A3Q96JT2 553 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 PPM1MQ96MI6 270 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ALS2CR12Q96Q35 445 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 COPS8Q99627 209 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ULBP3Q9BZM4 244 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 TRIT1Q9H3H1 467 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 AKIRIN1Q9H9L7 192 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 ARNT2Q9HBZ2 717 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SMOXQ9NWM0 555 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 IMPACTQ9P2X3 320 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 GUCA1BQ9UMX6 200 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 HEMK1Q9Y5R4 338 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 CAPN6Q9Y6Q1 641 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 RPS6KL1Q9Y6S9 549 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 UBA6A0AVT1 1052 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 PSMD3O43242 534 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 TIAF1O95411 115 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 NTRK1P04629 796 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 SLC35G4P0C7Q5 338 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 EBLN1P0CF75 366 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 FGF5P12034 268 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 ETS1P14921 441 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 POLR2CP19387 275 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 TCN2P20062 427 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 OAS2P29728 719 aaKnown RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 PDHA2P29803 388 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 ZNF140P52738 457 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 SNX1Q13596 522 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 ERV3-1Q14264 604 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 IL11RAQ14626 422 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 BCL7AQ4VC05 210 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 CCDC38Q502W7 563 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 FAM199XQ6PEV8 388 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 KLHL35Q6PF15 583 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 NAPRTQ6XQN6 538 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 PRSS42Q7Z5A4 293 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 PPP1R3BQ86XI6 285 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 TXLNBQ8N3L3 684 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 ESX1Q8N693 406 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 SLC35B2Q8TB61 432 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 C1orf54Q8WWF1 131 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 ULK4Q96C45 1275 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 STAMBPL1Q96FJ0 436 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 LINC00615Q96LM1 132 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 RMDN2Q96LZ7 410 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 PPP1R2P1Q96PQ5 205 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 CCM2Q9BSQ5 444 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 RAB33BQ9H082 229 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 LRRC40Q9H9A6 602 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 STARD5Q9NSY2 213 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 NLE1Q9NVX2 485 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 SMARCAL1Q9NZC9 954 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 FEZ2Q9UHY8 353 aaPredicted RBP9.36□□□□□ -0.91
MSH5-218ENST00000494646 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms