RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 SIGLEC11Q96RL6 698 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 PCYT2Q99447 389 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 MRPL45Q9BRJ2 306 aaKnown RBP10□□□□□ -0.81
LINC00488-201ENST00000494582 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
LINC00488-201ENST00000494582 UGT2B28Q9BY64 529 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 ZNF302Q9NR11 478 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 SMPD4Q9NXE4 827 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 CCNL1Q9UK58 526 aaPredicted RBP10□□□□□ -0.81
LINC00488-201ENST00000494582 PKP3Q9Y446 797 aa10□□□□□ -0.81
LINC00488-201ENST00000494582 HMX3A6NHT5 357 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 FAM25AB3EWG3 89 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 FAM25CB3EWG5 89 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 FAM25GB3EWG6 89 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 ENPP3O14638 875 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 RGS10O43665 173 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CYP7B1O75881 506 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CAPN1P07384 714 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 YES1P07947 543 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 POU3F3P20264 500 aaPredicted RBP9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MAGEA11P43364 429 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CHRNA4P43681 627 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 SLC15A1P46059 708 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CRISP3P54108 245 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 SNRPD2P62316 118 aaKnown RBP9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CD83Q01151 205 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CDH17Q12864 832 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 SNTA1Q13424 505 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 TOR2AQ5JU69 321 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MPZL3Q6UWV2 235 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 AHSA2Q719I0 299 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 BNIPLQ7Z465 357 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 NT5C1AQ9BXI3 368 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CDT1Q9H211 546 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 OR51E2Q9H255 320 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 DPEP3Q9H4B8 488 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CYP3A43Q9HB55 503 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MAGEL2Q9UJ55 1249 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 RNF6Q9Y252 685 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 COL1A2P08123 1366 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 LOC100506127A0A0U1RQW1 187 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 RECQL5O94762 991 aaPredicted RBP9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MLYCDO95822 493 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 JCHAINP01591 159 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 IL7P13232 177 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 ERCC2P18074 760 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 TKTL1P51854 596 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CDKN2DP55273 166 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 DEFA1P59665 94 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 DEFA3P59666 94 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 POU4F1Q01851 419 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 GALNT3Q14435 633 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 TARBP2Q15633 366 aaKnown RBP9.99□□□□□ -0.81
LINC00488-201ENST00000494582 UGP2Q16851 508 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 PLEKHG6Q3KR16 790 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 NOMO2Q5JPE7 1267 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 AGAP9Q5VTM2 703 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 KIAA0319Q5VV43 1072 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 DENND5AQ6IQ26 1287 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 LDB1Q86U70 411 aaPredicted RBP9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CCDC190Q86UF4 302 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 PGBD5Q8N414 524 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CCDC126Q96EE4 140 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 ZNF583Q96ND8 569 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 C1QTNF7Q9BXJ2 289 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 CXCL16Q9H2A7 254 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 RIBC2Q9H4K1 309 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 IKZF5Q9H5V7 419 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MINDY3Q9H8M7 445 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 AIG1Q9NVV5 245 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 MUTYHQ9UIF7 546 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 C3orf18Q9UK00 162 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 BTBD3Q9Y2F9 522 aa9.99□□□□□ -0.81
LINC00488-201ENST00000494582 A0A096LPI6 279 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 H3BUI4 141 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 GNGT2O14610 69 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 CYP2A6P11509 494 aaPredicted RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 C21orf33P30042 268 aaPredicted RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 PRDX3P30048 256 aaKnown RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 SULT1E1P49888 294 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 SERPINH1P50454 418 aaKnown RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 POLR2JP52435 117 aaKnown RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 AP2S1P53680 142 aaPredicted RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 HERVK_113P63132 956 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 LAMTOR4Q0VGL1 99 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 GPAT3Q53EU6 434 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 HABP4Q5JVS0 413 aaKnown RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 ATF7IP2Q5U623 682 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 FAM196AQ6ZSG2 479 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 KDELC2Q7Z4H8 507 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 RIOX2Q8IUF8 465 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 DEFB106AQ8N104 65 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 PTGR2Q8N8N7 351 aaPredicted RBP9.98□□□□□ -0.81
LINC00488-201ENST00000494582 OR52K2Q8NGK3 314 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 OR2T11Q8NH01 316 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 SLC47A1Q96FL8 570 aa9.98□□□□□ -0.81
LINC00488-201ENST00000494582 TRMT61AQ96FX7 289 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms