RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 NRTNQ99748 197 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 APOL2Q9BQE5 337 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 SOHLH2Q9NX45 425 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 LUZP4Q9P127 313 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 PKP3Q9Y446 797 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 ARL5AQ9Y689 179 aa12.34□□□□□ -0.43
SKA1-205ENST00000494518 STX7O15400 261 aaKnown RBP12.33□□□□□ -0.44
SKA1-205ENST00000494518 MFAP3LO75121 409 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 LCA5LO95447 670 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 PRAMEF1O95521 474 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 AGTP01019 485 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 POLBP06746 335 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 POLR2CP19387 275 aaPredicted RBP12.33□□□□□ -0.44
SKA1-205ENST00000494518 GNLYP22749 145 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 PTPN4P29074 926 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 CD97P48960 835 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 NR2C2P49116 596 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 CCL11P51671 97 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 KPNA2P52292 529 aaKnown RBP12.33□□□□□ -0.44
SKA1-205ENST00000494518 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
SKA1-205ENST00000494518 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 GPS2Q13227 327 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 ITGA9Q13797 1035 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 LCN10Q6JVE6 187 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 SLC38A9Q8NBW4 561 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 ZNF398Q8TD17 642 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 P3H4Q92791 437 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 QKIQ96PU8 341 aaKnown RBP eCLIP12.33□□□□□ -0.442e-9■■■■■ 48.3
SKA1-205ENST00000494518 FCRL5Q96RD9 977 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 FSD1LQ9BXM9 530 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 CHST8Q9H2A9 424 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 HACD3Q9P035 362 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 FKBPLQ9UIM3 349 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 ANKRD12Q6UB98 2062 aa12.33□□□□□ -0.44
SKA1-205ENST00000494518 PCSK5Q92824 1860 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 hCG_1818297A0A087WSY0 165 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 KCNJ13O60928 360 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 CPNE3O75131 537 aaKnown RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 SLC35G4P0C7Q5 338 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 HLA-DPA1P20036 260 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 SLC1A1P43005 524 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 PTGIRP43119 386 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 PGDP52209 483 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 EMP3P54852 163 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 TUBB4BP68371 445 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 HSD11B2P80365 405 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 PDE1BQ01064 536 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 MPP3Q13368 585 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 TUBB2AQ13885 445 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 TRIM14Q14142 442 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 TAZQ16635 292 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 UGT8Q16880 541 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 METRNLQ641Q3 311 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 APLFQ8IW19 511 aaPredicted RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 D2HGDHQ8N465 521 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 CPT1CQ8TCG5 803 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 ZNF501Q96CX3 271 aaPredicted RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 GORASP1Q9BQQ3 440 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 TUBB2BQ9BVA1 445 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 HEMGNQ9BXL5 484 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 FAM96AQ9H5X1 160 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 ASB8Q9H765 288 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 ACSS2Q9NR19 701 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 SLC24A2Q9UI40 661 aa12.32□□□□□ -0.44
SKA1-205ENST00000494518 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
SKA1-205ENST00000494518 CNTRLQ7Z7A1 2325 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 MGAT4DA6NG13 374 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 SLC9B1P1A6NJY1 282 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 H7C0C1 242 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 CCL22O00626 93 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 PSTPIP1O43586 416 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 VPS4BO75351 444 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ZBTB11O95625 1053 aaPredicted RBP12.31□□□□□ -0.44
SKA1-205ENST00000494518 EPOP01588 193 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 TPM1P09493 284 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 CDH3P22223 829 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 RBL1P28749 1068 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ATP5OP48047 213 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ABRQ12979 859 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 KRT33BQ14525 404 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms