RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CHPFQ8IZ52 775 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 FBXO39Q8N4B4 442 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 AGAP11Q8TF27 550 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ASZ1Q8WWH4 475 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 RHBDF1Q96CC6 855 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ERP27Q96DN0 273 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PHF21BQ96EK2 531 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SGF29Q96ES7 293 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 THOC1Q96FV9 657 aaKnown RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 SCARF2Q96GP6 870 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZNF514Q96K75 400 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 LENG8Q96PV6 779 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZNF382Q96SR6 550 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 CCT7Q99832 543 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 NTMT1Q9BV86 223 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 TEX101Q9BY14 249 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 C1orf21Q9H246 121 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 LRMDAQ9H2I8 198 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SERGEFQ9UGK8 458 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 LIMD1Q9UGP4 676 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 CD84Q9UIB8 345 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZFP69BQ9UJL9 534 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PRDM4Q9UKN5 801 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ADAMTS6Q9UKP5 1117 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 FZD4Q9ULV1 537 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 RNF112Q9ULX5 631 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZFR2Q9UPR6 939 aaKnown RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 TRAF6Q9Y4K3 522 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PIAS3Q9Y6X2 628 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 A0A1B0GTL3 188 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CFAP73A6NFT4 308 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 LRRC14BA6NHZ5 514 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TRPC5OSA6NMA1 111 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 NPIPB8E9PQR5 432 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 K7ESM1 405 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PLK4O00444 970 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PPP6CO00743 305 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 LIN7AO14910 233 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 RAD51BO15315 384 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MMP20O60882 483 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 RNASEH1O60930 286 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 RASSF9O75901 435 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TM7SF2O76062 418 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 KIAA0754O94854 1291 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 SUPT7LO94864 414 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 SIX3O95343 332 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 TRIM16O95361 564 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 ESRRBO95718 433 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MLYCDO95822 493 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 FTH1P02794 183 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 JUNP05412 331 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 SRFP11831 508 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MSH3P20585 1137 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 COL9A1P20849 921 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 ACADLP28330 430 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 EEF1DP29692 281 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 SLC6A12P48065 614 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 HNMTP50135 292 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CCR3P51677 355 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PKNOX1P55347 436 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 AP1S2P56377 157 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 BTKQ06187 659 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 GRSF1Q12849 480 aaKnown RBP eCLIP6.66□□□□□ -1.34
MSH5-217ENST00000494458 GRIK2Q13002 908 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 FZD5Q13467 585 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PON2Q15165 354 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PHKG1Q16816 387 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 WSCD2Q2TBF2 565 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 LSM12Q3MHD2 195 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 POM121L1PQ3SYA9 428 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 SLC44A4Q53GD3 710 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CFAP157Q5JU67 520 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 OGFOD2Q6N063 350 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 KIAA1161Q6NSJ0 714 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 KBTBD6Q86V97 674 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TMPRSS6Q8IU80 811 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 VRK3Q8IV63 474 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 SLC22A15Q8IZD6 547 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MYO1HQ8N1T3 1032 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 SYNPOQ8N3V7 929 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 OXR1Q8N573 874 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CCNYL1Q8N7R7 359 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TP53I13Q8NBR0 393 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 CEP70Q8NHQ1 597 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 GLMNQ92990 594 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 FAM136AQ96C01 138 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 NUS1Q96E22 293 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 DCUN1D1Q96GG9 259 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PRR11Q96HE9 360 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 NSL1Q96IY1 281 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 OR52B2Q96RD2 323 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 GAS2L1Q99501 681 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 TMEM79Q9BSE2 394 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CCM2Q9BSQ5 444 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 WRAP53Q9BUR4 548 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 NUSAP1Q9BXS6 441 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms