RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GALNT15Q8N3T1 639 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CHCHD4Q8N4Q1 142 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 IFT81Q8WYA0 676 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 TMEM159Q96B96 161 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 SLC38A3Q99624 504 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 FBXO6Q9NRD1 293 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 POT1Q9NUX5 634 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 WDR37Q9Y2I8 494 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 SPTBN4Q9H254 2564 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 OR52A4PA6NMU1 304 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 IFRD1O00458 451 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 KPNA5O15131 536 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 PPM1DO15297 605 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 APOA4P06727 396 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 SLC19A1P41440 591 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 MGAT5Q09328 741 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 SPIDRQ14159 915 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 ZNF658BQ4V348 819 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 SPRED1Q7Z699 444 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 TMPRSS12Q86WS5 348 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 KRT222Q8N1A0 295 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 LILRA3Q8N6C8 439 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 RMDN2Q96LZ7 410 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 GFM1Q96RP9 751 aaKnown RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 RHOXF2Q9BQY4 288 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 ZDHHC18Q9NUE0 388 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 IMP3Q9NV31 184 aaKnown RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 ZNF624Q9P2J8 865 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-209ENST00000494255 RABGEF1Q9UJ41 708 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 HEBP2Q9Y5Z4 205 aa12.21□□□□□ -0.45
TRA2A-209ENST00000494255 BPTFQ12830 3046 aa12.21□□□□□ -0.46
TRA2A-209ENST00000494255 IQCF5A8MTL0 148 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 E5RI56 91 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 HYAL3O43820 417 aaPredicted RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 RPLP0P05388 317 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 GSTA2P09210 222 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 MTHFD1P11586 935 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 PKMP14618 531 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 MAGEA4P43358 317 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 PREPP48147 710 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 CCL7P80098 99 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 MPP1Q00013 466 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 CUL1Q13616 776 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 KRT33BQ14525 404 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 NR1D2Q14995 579 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 RPE65Q16518 533 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 ZNF789Q5FWF6 425 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 CTSL3PQ5NE16 218 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 HES3Q5TGS1 186 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 KIAA0408Q6ZU52 694 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 OTOAQ7RTW8 1153 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 CNTN4Q8IWV2 1026 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 IFT20Q8IY31 132 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 LKAAEAR1Q8TD35 194 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 ASZ1Q8WWH4 475 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 AHCYL2Q96HN2 611 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 BIRC8Q96P09 236 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 OR52A5Q9H2C5 316 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 LRRN3Q9H3W5 708 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 PLAC1Q9HBJ0 212 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
TRA2A-209ENST00000494255 COMMD10Q9Y6G5 202 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 RP1P56715 2156 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 ASXL3Q9C0F0 2248 aa12.2□□□□□ -0.46
TRA2A-209ENST00000494255 SLC5A10A0PJK1 596 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 LILRA5A6NI73 299 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 TCEA3O75764 348 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 MT-CO3P00414 261 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 JUPP14923 745 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CHRM3P20309 590 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 AOAHP28039 575 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 NDUFS1P28331 727 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 PDHA2P29803 388 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CCR7P32248 378 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 LEPRP48357 1165 aaKnown RBP12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CD151P48509 253 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CSE1LP55060 971 aaKnown RBP12.19□□□□□ -0.46
TRA2A-209ENST00000494255 OR1D5P58170 312 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 HSPA14Q0VDF9 509 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 AMZ1Q400G9 498 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 TEX35Q5T0J7 233 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 TEDDM1Q5T9Z0 273 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
TRA2A-209ENST00000494255 CNSTQ6PJW8 725 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 NAPRTQ6XQN6 538 aa12.19□□□□□ -0.46
TRA2A-209ENST00000494255 RBM44Q6ZP01 1051 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms