RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TCF7P36402 384 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 MATR3P43243 847 aaKnown RBP eCLIP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CTSCP53634 463 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 HYAL1Q12794 435 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 IL11RAQ14626 422 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 DECR1Q16698 335 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 HYAL4Q2M3T9 481 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF805Q5CZA5 627 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 LRIF1Q5T3J3 769 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GFI1BQ5VTD9 330 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ZDHHC20Q5W0Z9 365 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PET117Q6UWS5 81 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 FOXL2NBQ6ZUU3 175 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ERN2Q76MJ5 926 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ARMC9Q7Z3E5 817 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CCDC190Q86UF4 302 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CUZD1Q86UP6 607 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 NFE4Q86UQ8 179 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ARID3BQ8IVW6 561 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CHERPQ8IWX8 916 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 MAML2Q8IZL2 1156 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 BEST3Q8N1M1 668 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GUF1Q8N442 669 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 Q8NFD4 153 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 OR1J2Q8NGS2 313 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 OR8K5Q8NH50 307 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 LMO3Q8TAP4 145 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GRAPLQ8TC17 118 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 FBXO17Q96EF6 278 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ERO1AQ96HE7 468 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GRAMD2BQ96HH9 432 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 FER1L6-AS2Q96M78 137 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CEP295NLQ96MC4 621 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GBP5Q96PP8 586 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PAFAH2Q99487 392 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CMKLR1Q99788 373 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CITED2Q99967 270 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 SLX1AQ9BQ83 275 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 SRSF8Q9BRL6 282 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CCDC106Q9BWC9 280 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PANK2Q9BZ23 570 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 SPRY4Q9C004 299 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 DNAI2Q9GZS0 605 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ANKRD2Q9GZV1 360 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PIGMQ9H3S5 423 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 OPA3Q9H6K4 179 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GAREM1Q9H706 876 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 SEBOXQ9HB31 216 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ECHDC1Q9NTX5 307 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ARHGEF38Q9NXL2 777 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 GDE1Q9NZC3 331 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 WDR35Q9P2L0 1181 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CRNNQ9UBG3 495 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 IL17BQ9UHF5 180 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 DBNLQ9UJU6 430 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 KLHL20Q9Y2M5 609 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CLIC4Q9Y696 253 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PTPRCP08575 1304 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 A6NL46 340 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 BMPR1BO00238 502 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 OGG1O15527 345 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SYNCRIPO60506 623 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GOSR1O95249 250 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SLU7O95391 586 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 PPP1R3DO95685 299 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 INHBAP08476 426 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 VPREB1P12018 145 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CDH1P12830 882 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 FDPSP14324 419 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ANXA7P20073 488 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 S1PR1P21453 382 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 AHRP35869 848 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 NR2C2P49116 596 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CLK1P49759 484 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 RAB28P51157 221 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ALDH3A2P51648 485 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CCR3P51677 355 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CSE1LP55060 971 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SREBF2Q12772 1141 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ZBTB17Q13105 803 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GTF2H2Q13888 395 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 KCNC3Q14003 757 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 MORF4L2Q15014 288 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 E2F5Q15329 346 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 TAF13Q15543 124 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 TYSND1Q2T9J0 566 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 STPG1Q5TH74 334 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GTF2H2CQ6P1K8 395 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 PAPD4Q6PIY7 484 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 TRAT1Q6PIZ9 186 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 BRAT1Q6PJG6 821 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GSG1LQ6UXU4 331 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 C9orf139Q6ZV77 190 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GET4Q7L5D6 327 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CCDC91Q7Z6B0 441 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SDCCAG8Q86SQ7 713 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CREBRFQ8IUR6 639 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 UNC45BQ8IWX7 931 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF34Q8IZ26 560 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms