RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	C12orf66	Q96MD2	445 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	NLN	Q9BYT8	704 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SOHLH2	Q9NX45	425 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	IL17C	Q9P0M4	197 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	CACNA1D	Q01668	2161 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161		A0A0A6YYK5	440 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	SSU72P8	A0A1W2PR75	194 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	LDLR	P01130	860 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	KLK3	P07288	261 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	RAB40AL	P0C0E4	278 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	HNRNPH3	P31942	346 aa	Known RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	SPAM1	P38567	509 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	VAV2	P52735	878 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	WNT3A	P56704	352 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	GSDMD	P57764	484 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	ZBED6	P86452	979 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	PPP2R5E	Q16537	467 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	LDLRAP1	Q5SW96	308 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	GLIS1	Q8NBF1	620 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	OR4E2	Q8NGC2	313 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	OR8K5	Q8NH50	307 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	CPT1B	Q92523	772 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	RNF25	Q96BH1	459 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	CLIP3	Q96DZ5	547 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	RMDN2	Q96LZ7	410 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	TEKT5	Q96M29	485 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	LRFN5	Q96NI6	719 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	RANBP9	Q96S59	729 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	XPO4	Q9C0E2	1151 aa	Known RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	KIR3DX1	Q9H7L2	352 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	LATS2	Q9NRM7	1088 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	PCMTD2	Q9NV79	361 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	ASF1B	Q9NVP2	202 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	UVRAG	Q9P2Y5	699 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	CAPN11	Q9UMQ6	739 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	BTRC	Q9Y297	605 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	PCDHGB7	Q9Y5F8	929 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	CENPE	Q02224	2701 aa		13.33	□□□□□ -0.28
SAMM50-204	ENST00000493161	GLYATL1P3	A0A0U1RQE8	302 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	TMEM150C	B9EJG8	249 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	MASP2	O00187	686 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	SGTA	O43765	313 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	CBX6	O95503	412 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	POLB	P06746	335 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	H2AFZ	P0C0S5	128 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	NFKB1	P19838	968 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	WASHC5	Q12768	1159 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	PRKD1	Q15139	912 aa	Predicted RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	LLGL1	Q15334	1064 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	TMTC4	Q5T4D3	741 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	ARMC6	Q6NXE6	501 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	H2AFV	Q71UI9	128 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	DAAM2	Q86T65	1068 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	RFX6	Q8HWS3	928 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	TMEM151B	Q8IW70	566 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	SYTL1	Q8IYJ3	562 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	CISD2	Q8N5K1	135 aa	Known RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	DTX3L	Q8TDB6	740 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	BLOC1S5	Q8TDH9	187 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	MRGPRX2	Q96LB1	330 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	SRPK1	Q96SB4	655 aa	Known RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	SMAD5	Q99717	465 aa	Known RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	KLHL25	Q9H0H3	589 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	GPR83	Q9NYM4	423 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	FAM153A	Q9UHL3	310 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	POMT2	Q9UKY4	750 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	HIVEP3	Q5T1R4	2406 aa		13.32	□□□□□ -0.28
SAMM50-204	ENST00000493161	MGAT4D	A6NG13	374 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	ENO4	A6NNW6	628 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	ZNF487	B1APH4	448 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	PPP1R12A	O14974	1030 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	KRT1	P04264	644 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	GYPC	P04921	128 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	ATXN8OS	P0DMR3	200 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	ST6GAL1	P15907	406 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	PECAM1	P16284	738 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	HLA-DPA1	P20036	260 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	MSH3	P20585	1137 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	CDH3	P22223	829 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	AKT1	P31749	480 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	LMAN1	P49257	510 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	FOXL2	P58012	376 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	FANCC	Q00597	558 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	MICALCL	Q6ZW33	695 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	MED25	Q71SY5	747 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	GLT6D1	Q7Z4J2	308 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	OR2L2	Q8NH16	312 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	MAK16	Q9BXY0	300 aa	Known RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	SLC29A3	Q9BZD2	475 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	TRABD	Q9H4I3	376 aa		13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMM50-204	ENST00000493161	LRBA	P50851	2863 aa		13.31	□□□□□ -0.28

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