RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 ZBTB11O95625 1053 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 ATP1B2P14415 290 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 TUBB3Q13509 450 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 PARP6Q2NL67 630 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 FAM83HQ6ZRV2 1179 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 ELMO2Q96JJ3 720 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 C12orf66Q96MD2 445 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 ALS2CR12Q96Q35 445 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 KIR3DX1Q9H7L2 352 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 POLHQ9Y253 713 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 SDK2Q58EX2 2172 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 IGHV5-51A0A0C4DH38 117 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 MKRN2OSH3BPM6 223 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 IFRD1O00458 451 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 KATNA1O75449 491 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 ZNF28P17035 718 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 PSMB4P28070 264 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 PBLDP30039 288 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 CD151P48509 253 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 ZNF75DP51815 510 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 VAV2P52735 878 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 RPS15P62841 145 aaKnown RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TUBB4BP68371 445 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 XIAPP98170 497 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 RPA4Q13156 261 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 P3H1Q32P28 736 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 CAPRIN2Q6IMN6 1127 aaKnown RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 ARHGEF18Q6ZSZ5 1173 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 DET1Q7L5Y6 550 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 PEX26Q7Z412 305 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 NXPE1Q8N323 547 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 D2HGDHQ8N465 521 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 HM13Q8TCT9 377 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TBL1YQ9BQ87 522 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 FGF21Q9NSA1 209 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 KCND1Q9NSA2 647 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 SLC24A2Q9UI40 661 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 FKBPLQ9UIM3 349 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
COL6A1-205ENST00000492851 ZFC3H1O60293 1989 aaKnown RBP12.16□□□□□ -0.46
COL6A1-205ENST00000492851 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 F8W8V4 182 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 H7C0S8 307 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 QSOX1O00391 747 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 GPR39O43194 453 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 CREG1O75629 220 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 POLBP06746 335 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 KLK3P07288 261 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-205ENST00000492851 FOLR1P15328 257 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 CASRP41180 1078 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 PRLHRP49683 370 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 MSLNQ13421 630 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-205ENST00000492851 DNASE1L3Q13609 305 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 PTPRCAPQ14761 206 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 LINC00523Q86TU6 105 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 KLHDC8BQ8IXV7 354 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 ACVR1CQ8NER5 493 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 GPR150Q8NGU9 434 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 CCDC110Q8TBZ0 833 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 ABHD17AQ96GS6 310 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 MAP3K3Q99759 626 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 GORASP1Q9BQQ3 440 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 C10orf88Q9H8K7 445 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 LRRC40Q9H9A6 602 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 LATS2Q9NRM7 1088 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 C1GALT1Q9NS00 363 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
COL6A1-205ENST00000492851 OR6C74A6NCV1 312 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 LDB2O43679 373 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 CPNE3O75131 537 aaKnown RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 AP2A2O94973 939 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 GAS8O95995 478 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 F8A1P23610 371 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 STIP1P31948 543 aaKnown RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 MC4RP32245 332 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 CA5AP35218 305 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 ZNF140P52738 457 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms