RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 LMAN1P49257 510 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 SH3BP2P78314 561 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 CDH17Q12864 832 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 PRUNE1Q86TP1 453 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 NLGN4XQ8N0W4 816 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 ZNF843Q8N446 348 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 NLGN4YQ8NFZ3 816 aaPredicted RBP30.64■■■□□ 2.5
LDB1-204ENST00000490751 SEMA4CQ9C0C4 833 aa30.64■■■□□ 2.5
LDB1-204ENST00000490751 TMEM184BQ9Y519 407 aaPredicted RBP30.64■■■□□ 2.5
LDB1-204ENST00000490751 KALRNO60229 2985 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 MROH6A6NGR9 719 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 ETS1P14921 441 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 CACNG1Q06432 222 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 GSE1Q14687 1217 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 CCDC38Q502W7 563 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 TIPARPQ7Z3E1 657 aaKnown RBP30.63■■■□□ 2.49
LDB1-204ENST00000490751 PIANPQ8IYJ0 282 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 KLHL6Q8WZ60 621 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 OR6C1Q96RD1 312 aa30.63■■■□□ 2.49
LDB1-204ENST00000490751 C17orf113A0A1B0GUU1 675 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 E7EVH7 732 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 SUN1O94901 812 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 MSNP26038 577 aaKnown RBP30.62■■■□□ 2.49
LDB1-204ENST00000490751 CYP4F2P78329 520 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 SIX1Q15475 284 aaPredicted RBP30.62■■■□□ 2.49
LDB1-204ENST00000490751 DBN1Q16643 649 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 CAPRIN2Q6IMN6 1127 aaKnown RBP30.62■■■□□ 2.49
LDB1-204ENST00000490751 PPP1R21Q6ZMI0 780 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 CCM2Q9BSQ5 444 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 COG4Q9H9E3 785 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 RAB6BQ9NRW1 208 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 SLC24A2Q9UI40 661 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 PIKFYVEQ9Y2I7 2098 aa30.62■■■□□ 2.49
LDB1-204ENST00000490751 GAS8O95995 478 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 PSMA3P25788 255 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 MAP4P27816 1152 aaKnown RBP30.61■■■□□ 2.49
LDB1-204ENST00000490751 CCZ1BP86790 482 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 CCZ1P86791 482 aaPredicted RBP30.61■■■□□ 2.49
LDB1-204ENST00000490751 SEMA5AQ13591 1074 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 SKIDA1Q1XH10 827 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 CLDN19Q8N6F1 224 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 CCDC89Q8N998 374 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 GLIS1Q8NBF1 620 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 ZFPM2Q8WW38 1151 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 EXTL1Q92935 676 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 KIR3DX1Q9H7L2 352 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 VPS37BQ9H9H4 285 aa30.61■■■□□ 2.49
LDB1-204ENST00000490751 OR5K3A6NET4 321 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 OR51F1A6NGY5 319 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 DLGAP3O95886 979 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 ITGB2P05107 769 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 GRIA1P42261 906 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 LINC00303Q3SY05 128 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 UBXN4Q92575 508 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 RNF31Q96EP0 1072 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 SLC12A9Q9BXP2 914 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 SEMA5BQ9P283 1151 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 PAK5Q9P286 719 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 COLEC10Q9Y6Z7 277 aa30.6■■■□□ 2.49
LDB1-204ENST00000490751 BAHCC1Q9P281 2608 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 IGHV5-51A0A0C4DH38 117 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 NELFEP18615 380 aaKnown RBP30.59■■■□□ 2.49
LDB1-204ENST00000490751 KRT33BQ14525 404 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 CCNG2Q16589 344 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 OOSP2Q86WS3 158 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 MED8Q96G25 268 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 ELMO2Q96JJ3 720 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 MAP3K3Q99759 626 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 ULBP3Q9BZM4 244 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 HRASLS2Q9NWW9 162 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 SMARCAL1Q9NZC9 954 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 HEBP2Q9Y5Z4 205 aa30.59■■■□□ 2.49
LDB1-204ENST00000490751 HEATR9A2RTY3 570 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 CCDC162PA2VCL2 907 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 ZSCAN5DPP0CG00 497 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 NDUFS1P28331 727 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 FOXN2P32314 431 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 IL11RAQ14626 422 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 ZNF658BQ4V348 819 aaPredicted RBP30.58■■■□□ 2.49
LDB1-204ENST00000490751 DNTTIP2Q5QJE6 756 aaKnown RBP30.58■■■□□ 2.49
LDB1-204ENST00000490751 TRIM58Q8NG06 486 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 OR13J1Q8NGT2 312 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 KIAA1143Q96AT1 154 aaPredicted RBP30.58■■■□□ 2.49
LDB1-204ENST00000490751 CD180Q99467 661 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 ARHGAP9Q9BRR9 750 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 TLR10Q9BXR5 811 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 OR52A5Q9H2C5 316 aa30.58■■■□□ 2.49
LDB1-204ENST00000490751 TRIT1Q9H3H1 467 aaKnown RBP30.58■■■□□ 2.49
LDB1-204ENST00000490751 GPN2Q9H9Y4 310 aaPredicted RBP30.58■■■□□ 2.49
LDB1-204ENST00000490751 LOC101059948A0A1B0GTJ6 334 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 OR6C74A6NCV1 312 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 AP2A2O94973 939 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 APRTP07741 180 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 ZNF28P17035 718 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 ABHD18Q0P651 414 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 LAMB3Q13751 1172 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 ITIH4Q14624 930 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 RASGRP3Q8IV61 690 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 UNC5BQ8IZJ1 945 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 SLC41A2Q96JW4 573 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms