RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 NDUFS1P28331 727 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 MAPK9P45984 424 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 CD151P48509 253 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 GPR18Q14330 331 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 SEMA3AQ14563 771 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 TBC1D25Q3MII6 688 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 ANKRD20A4Q4UJ75 823 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 IZUMO3Q5VZ72 239 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 XKR5Q6UX68 686 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 TMEM135Q86UB9 458 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 LILRA3Q8N6C8 439 aaPredicted RBP16.96■□□□□ 0.31
MDC1-206ENST00000489540 PRR11Q96HE9 360 aaPredicted RBP16.96■□□□□ 0.31
MDC1-206ENST00000489540 TCF12Q99081 682 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 THSD1Q9NS62 852 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 MARCH4Q9P2E8 410 aaPredicted RBP16.96■□□□□ 0.31
MDC1-206ENST00000489540 LOXL2Q9Y4K0 774 aa16.96■□□□□ 0.31
MDC1-206ENST00000489540 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 PRMT5O14744 637 aaPredicted RBP16.96■□□□□ 0.3
MDC1-206ENST00000489540 CSF2RBP32927 897 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 ARCN1P48444 511 aaKnown RBP16.96■□□□□ 0.3
MDC1-206ENST00000489540 KRT33BQ14525 404 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 MORF4L2Q15014 288 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 DNAJC21Q5F1R6 531 aaKnown RBP16.96■□□□□ 0.3
MDC1-206ENST00000489540 KLHL35Q6PF15 583 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 FOXR1Q6PIV2 292 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 LDB1Q86U70 411 aaPredicted RBP16.96■□□□□ 0.3
MDC1-206ENST00000489540 LRRC6Q86X45 466 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 OTUD6BQ8N6M0 293 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 SPATA4Q8NEY3 305 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 SPDYE1Q8NFV5 336 aaPredicted RBP16.96■□□□□ 0.3
MDC1-206ENST00000489540 GPR150Q8NGU9 434 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 ELMO1Q92556 727 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 SIGLEC10Q96LC7 697 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 CCDC74BQ96LY2 380 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 KRT12Q99456 494 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 CARD6Q9BX69 1037 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 OR52A5Q9H2C5 316 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 MAD1L1Q9Y6D9 718 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 RPS6KL1Q9Y6S9 549 aa16.96■□□□□ 0.3
MDC1-206ENST00000489540 ZNF106Q9H2Y7 1883 aaKnown RBP16.95■□□□□ 0.3
MDC1-206ENST00000489540 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
MDC1-206ENST00000489540 TTI1O43156 1089 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 USP1O94782 785 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 TNFSF15O95150 251 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 ITGA2BP08514 1039 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 JMJD7P0C870 316 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 THRAP10827 490 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 MPSTP25325 297 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 RNF187Q5TA31 235 aaPredicted RBP16.95■□□□□ 0.3
MDC1-206ENST00000489540 NEPROQ6NW34 567 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 AGBL5Q8NDL9 886 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 RMDN2Q96LZ7 410 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 ASCL3Q9NQ33 180 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 TMEM9Q9P0T7 183 aa16.95■□□□□ 0.3
MDC1-206ENST00000489540 CFAP20Q9Y6A4 193 aaKnown RBP16.95■□□□□ 0.3
MDC1-206ENST00000489540 UNC13CQ8NB66 2214 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 NDC80O14777 642 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 TYRP1P17643 537 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 RPS3P23396 243 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■□□□ 13.9
MDC1-206ENST00000489540 PDHA2P29803 388 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 CSTF2P33240 577 aaKnown RBP eCLIP16.94■□□□□ 0.3
MDC1-206ENST00000489540 C16orf72Q14CZ0 275 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 PTRHD1Q6GMV3 140 aaKnown RBP16.94■□□□□ 0.3
MDC1-206ENST00000489540 RCBTB1Q8NDN9 531 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 SNIP1Q8TAD8 396 aaKnown RBP16.94■□□□□ 0.3
MDC1-206ENST00000489540 ZNF669Q96BR6 464 aaPredicted RBP16.94■□□□□ 0.3
MDC1-206ENST00000489540 STAMBPL1Q96FJ0 436 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 ZDHHC12Q96GR4 267 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 FCRL3Q96P31 734 aaPredicted RBP16.94■□□□□ 0.3
MDC1-206ENST00000489540 NAT9Q9BTE0 207 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 RAB33BQ9H082 229 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 KIR3DX1Q9H7L2 352 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 OGFRQ9NZT2 677 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 EPHA6Q9UF33 1036 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 GNPTGQ9UJJ9 305 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 VPS9D1Q9Y2B5 631 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 RAXQ9Y2V3 346 aa16.94■□□□□ 0.3
MDC1-206ENST00000489540 IGF2RP11717 2491 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 ZCWPW2A0A1B0GU75 182 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 SLC5A10A0PJK1 596 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 FAM187AA6NFU0 413 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 EFCAB8A8MWE9 144 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 CDRT15L2A8MXV6 281 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 GOLGA8KD6RF30 607 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 GOLGA8TH3BQL2 631 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 C9P02748 559 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 TUBB4AP04350 444 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 OGNP20774 298 aaKnown RBP16.93■□□□□ 0.3
MDC1-206ENST00000489540 PREPP48147 710 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 THOC5Q13769 683 aaKnown RBP16.93■□□□□ 0.3
MDC1-206ENST00000489540 PLCL1Q15111 1095 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 TYSND1Q2T9J0 566 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 SYTL3Q4VX76 610 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 HIBCHQ6NVY1 386 aaPredicted RBP16.93■□□□□ 0.3
MDC1-206ENST00000489540 ARHGAP22Q7Z5H3 698 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 PDZD3Q86UT5 571 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 LMNTD2Q8IXW0 634 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 PDIK1LQ8N165 341 aa16.93■□□□□ 0.3
MDC1-206ENST00000489540 TFGQ92734 400 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms