RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CD151P48509 253 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 ITGA8P53708 1063 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 ARL4CP56559 192 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 ZFP36L1Q07352 338 aaKnown RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 CALCOCO2Q13137 446 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 BBS9Q3SYG4 887 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 SYTL3Q4VX76 610 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 C3orf38Q5JPI3 329 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 PTRHD1Q6GMV3 140 aaKnown RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 HIBCHQ6NVY1 386 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 NEPROQ6NW34 567 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 TMEM71Q6P5X7 295 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 WDR74Q6RFH5 385 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 B3GNT8Q7Z7M8 397 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 LDB1Q86U70 411 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 LMNTD2Q8IXW0 634 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 OR4D9Q8NGE8 314 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 GABPB2Q8TAK5 448 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 ZFPM2Q8WW38 1151 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 ZCCHC14Q8WYQ9 949 aaKnown RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 NCSTNQ92542 709 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 TMEM159Q96B96 161 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 FCRL3Q96P31 734 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 INSM2Q96T92 566 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 NUDT22Q9BRQ3 303 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 TBC1D10AQ9BXI6 508 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
CXCL12-207ENST00000488591 GNPTGQ9UJJ9 305 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 FAM169AQ9Y6X4 670 aa14.73□□□□□ -0.05
CXCL12-207ENST00000488591 UBA6A0AVT1 1052 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 GOLGA8KD6RF30 607 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 GOLGA8TH3BQL2 631 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 KPNA5O15131 536 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 UBXN7O94888 489 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SEC31AO94979 1220 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 TTC4O95801 387 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 MPOP05164 745 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 OGNP20774 298 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 ARNTP27540 789 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 RBMS1P29558 406 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 PDX1P52945 283 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 LIMK2P53671 638 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 GABREP78334 506 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 DHX9Q08211 1270 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 TRA2AQ13595 282 aaKnown RBP eCLIP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 TUBB2AQ13885 445 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 BOP1Q14137 746 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 GPR18Q14330 331 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 PLCL1Q15111 1095 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 LONRF1Q17RB8 773 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 WHAMMP3Q1A5X7 153 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 KLHL35Q6PF15 583 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 FOXR1Q6PIV2 292 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 ZNF572Q7Z3I7 529 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 PLXDC1Q8IUK5 500 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SLITRK4Q8IW52 837 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 LILRA3Q8N6C8 439 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 KDF1Q8NAX2 398 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 MDM1Q8TC05 714 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 CALML6Q8TD86 181 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 PANX3Q96QZ0 392 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 CMKLR1Q99788 373 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 EBNA1BP2Q99848 306 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 ERP44Q9BS26 406 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 TUBB2BQ9BVA1 445 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 CARD6Q9BX69 1037 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SEMA6CQ9H3T2 930 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 C20orf96Q9NUD7 363 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 DKK4Q9UBT3 224 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SATB2Q9UPW6 733 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 SNX24Q9Y343 169 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 UTP11Q9Y3A2 253 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 CFAP20Q9Y6A4 193 aaKnown RBP14.72□□□□□ -0.05
CXCL12-207ENST00000488591 PIKFYVEQ9Y2I7 2098 aa14.72□□□□□ -0.05
CXCL12-207ENST00000488591 IGHV5-10-1A0A0J9YXX1 117 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 ZCWPW2A0A1B0GU75 182 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 RAD51CO43502 376 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 APOA4P06727 396 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 HOXB3P14651 431 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 ITGB6P18564 788 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 RPS3P23396 243 aaKnown RBP eCLIP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 RPL21P46778 160 aaKnown RBP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 PREPP48147 710 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 EIF3BP55884 814 aaKnown RBP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 BRD3Q15059 726 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 TMED2Q15363 201 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 HIF1AQ16665 826 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 TYSND1Q2T9J0 566 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 ZNF658BQ4V348 819 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 ZNF574Q6ZN55 896 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 RAB11FIP2Q7L804 512 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 AGGF1Q8N302 714 aaeCLIP14.71□□□□□ -0.05
CXCL12-207ENST00000488591 FBXO39Q8N4B4 442 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 GSDMBQ8TAX9 411 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 ASZ1Q8WWH4 475 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 LRRC39Q96DD0 335 aa14.71□□□□□ -0.05
CXCL12-207ENST00000488591 CCDC74BQ96LY2 380 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms