RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 BRD3Q15059 726 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 TMED2Q15363 201 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SHBQ15464 509 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 UAP1Q16222 522 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 DEFB133Q30KQ1 61 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 TTLL9Q3SXZ7 439 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SYTL3Q4VX76 610 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 ZNF789Q5FWF6 425 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 STPG1Q5TH74 334 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 OTOAQ7RTW8 1153 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SLC25A45Q8N413 288 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 GPATCH11Q8N954 259 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 MYRIPQ8NFW9 859 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 CCL4L1Q8NHW4 92 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SETD7Q8WTS6 366 aaKnown RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 NAT14Q8WUY8 206 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 ELMO1Q92556 727 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 CAVIN3Q969G5 261 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 FAM122AQ96E09 287 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 MRRFQ96E11 262 aaKnown RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 CCDC97Q96F63 343 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 FUT8Q9BYC5 575 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 TXLNGYQ9BZA5 131 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 ACSS3Q9H6R3 686 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SARS2Q9NP81 518 aaKnown RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 RXFP3Q9NSD7 469 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 UCKL1Q9NWZ5 548 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 TAS2R13Q9NYV9 303 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 TAAR2Q9P1P5 351 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 FAM8A1Q9UBU6 413 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SLC23A2Q9UGH3 650 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 ACSL5Q9ULC5 683 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 VWA7Q9Y334 891 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 PLEKHM1Q9Y4G2 1056 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 GPR179Q6PRD1 2367 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 EXOC1LA0A1B0GW35 172 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 IQCF5A8MTL0 148 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 PDZK1P1A8MUH7 402 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 POC1B-GALNT4F8VUJ3 575 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 IFRD1O00458 451 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 TPP1O14773 563 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 LIN7AO14910 233 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 FLRT2O43155 660 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 SGTAO43765 313 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 VPS26AO75436 327 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 PIAS1O75925 651 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 F7P08709 466 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 SAT1P21673 171 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 GABRB3P28472 473 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 SKIV2L2P42285 1042 aaKnown RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 HALP42357 657 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 GRK6P43250 576 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 CSE1LP55060 971 aaKnown RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 DMPKQ09013 629 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 RPA4Q13156 261 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 BOP1Q14137 746 aaKnown RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 METRNLQ641Q3 311 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 FAM45BPQ6NSW5 357 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 C11orf96Q7Z7L8 435 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 KIAA2013Q8IYS2 634 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 KRT222Q8N1A0 295 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 EID2Q8N6I1 236 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 FAM45AQ8TCE6 357 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 RHBDD1Q8TEB9 315 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 AENQ8WTP8 325 aaKnown RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 ZDHHC1Q8WTX9 485 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 ASZ1Q8WWH4 475 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 TMEM159Q96B96 161 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 ATXN7L3BQ96GX2 97 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 VPS39Q96JC1 886 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 ELMO2Q96JJ3 720 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 BIRC8Q96P09 236 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 AARSD1Q9BTE6 412 aaKnown RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 RHOJQ9H4E5 214 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 SMYD2Q9NRG4 433 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 NLGN3Q9NZ94 848 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 SLC17A6Q9P2U8 582 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 GULP1Q9UBP9 304 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 PCYT1BQ9Y5K3 369 aaPredicted RBP10.1□□□□□ -0.79
SKA1-204ENST00000488454 PSAT1Q9Y617 370 aa10.1□□□□□ -0.79
SKA1-204ENST00000488454 VPS13AQ96RL7 3174 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 CCDC151A5D8V7 595 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 OR5K4A6NMS3 321 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 B4DGG1 531 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 CTIFO43310 598 aaKnown RBP10.09□□□□□ -0.79
SKA1-204ENST00000488454 NIPSNAP2O75323 286 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 SLC35G4P0C7Q5 338 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 RPL10P27635 214 aaKnown RBP10.09□□□□□ -0.79
SKA1-204ENST00000488454 AOAHP28039 575 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 CCR7P32248 378 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 HSD17B3P37058 310 aa10.09□□□□□ -0.79
SKA1-204ENST00000488454 SERPINB9P50453 376 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms