RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MYO1HQ8N1T3 1032 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 ZNF781Q8N8C0 355 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 STON2Q8WXE9 905 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 GLYATL1Q969I3 302 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 NUS1Q96E22 293 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 PHF21BQ96EK2 531 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 MMP17Q9ULZ9 603 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 SUPT3HB4E1H0 165 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 STX16-NPEPL1H3BU86 382 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 STX16O14662 325 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 KPNA5O15131 536 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 SUPT3HO75486 399 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 RECQL5O94762 991 aaPredicted RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 C6P13671 934 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 ENO3P13929 434 aaPredicted RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 GFAPP14136 432 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 MSH3P20585 1137 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 DRD3P35462 400 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 RPL14P50914 215 aaKnown RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 DGKEP52429 567 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 DPTQ07507 201 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 STARD3Q14849 445 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 ZNF776Q68DI1 518 aaPredicted RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 CEP68Q76N32 757 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 GPSM1Q86YR5 675 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 FBXO39Q8N4B4 442 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 PTGR2Q8N8N7 351 aaPredicted RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 OR2T3Q8NH03 318 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 RLN3Q8WXF3 142 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 EXT2Q93063 718 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 SKA1Q96BD8 255 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 ACTR5Q9H9F9 607 aaPredicted RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 RXFP3Q9NSD7 469 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 VTI1BQ9UEU0 232 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CACNA1AO00555 2505 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 PLK4O00444 970 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 ZNF195O14628 629 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 MID1O15344 667 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 TSPAN6O43657 245 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 LZTS3O60299 673 aaPredicted RBP12.5□□□□□ -0.41
NELFE-209ENST00000488426 GDF9O60383 454 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 UBOX5O94941 541 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 APBB3O95704 486 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 ITGB6P18564 788 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 BCKDHBP21953 392 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 MPSTP25325 297 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 CNR2P34972 360 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 ID4P47928 161 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 MRPS21P82921 87 aaKnown RBP12.5□□□□□ -0.41
NELFE-209ENST00000488426 ZBTB16Q05516 673 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 HSF5Q4G112 596 aaPredicted RBP12.5□□□□□ -0.41
NELFE-209ENST00000488426 LAIR1Q6GTX8 287 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 PHYKPLQ8IUZ5 450 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 ERP27Q96DN0 273 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
NELFE-209ENST00000488426 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 GSTO2Q9H4Y5 243 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 NUDT4Q9NZJ9 180 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 EBF1Q9UH73 591 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 APOBEC2Q9Y235 224 aaKnown RBP12.5□□□□□ -0.41
NELFE-209ENST00000488426 SPEGQ15772 3267 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
NELFE-209ENST00000488426 CNOT1A5YKK6 2376 aaKnown RBP12.49□□□□□ -0.41
NELFE-209ENST00000488426 CCDC163A0A0D9SF12 145 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 MATN2O00339 956 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 HDAC3O15379 428 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 MMP20O60882 483 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 FTH1P02794 183 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 RETP07949 1114 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 AOAHP28039 575 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 SERPINB3P29508 390 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 ALDH18A1P54886 795 aaKnown RBP12.49□□□□□ -0.41
NELFE-209ENST00000488426 GBX1Q14549 363 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 PFKFB4Q16877 469 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
NELFE-209ENST00000488426 PLK5Q496M5 336 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 UNC50Q53HI1 259 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 ACSBG2Q5FVE4 666 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 PLEKHS1Q5SXH7 462 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 AGBL4Q5VU57 503 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 MAVSQ7Z434 540 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 MTDHQ86UE4 582 aaKnown RBP12.49□□□□□ -0.41
NELFE-209ENST00000488426 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 FAR2Q96K12 515 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 C1QTNF3Q9BXJ4 246 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms