RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FAM92BQ6ZTR7 304 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 PRSS42Q7Z5A4 293 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 CLDN19Q8N6F1 224 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 ZFPM2Q8WW38 1151 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 TTC9Q92623 222 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 RMDN2Q96LZ7 410 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 C12orf66Q96MD2 445 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 CCM2Q9BSQ5 444 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 ZNF768Q9H5H4 540 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 SIDT1Q9NXL6 827 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 PAK5Q9P286 719 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 PILRAQ9UKJ1 303 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 ZKSCAN5Q9Y2L8 839 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 SDK2Q58EX2 2172 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 BPTFQ12830 3046 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SMG1Q96Q15 3661 aaKnown RBP11.18□□□□□ -0.62
SPEN-205ENST00000487496 HEATR9A2RTY3 570 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 CCDC162PA2VCL2 907 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 OR51F1A6NGY5 319 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 POLR1CO15160 346 aaPredicted RBP11.18□□□□□ -0.62
SPEN-205ENST00000487496 CEP104O60308 925 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 RAD1O60671 282 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 RASSF9O75901 435 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 PRB1P04280 392 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 APRTP07741 180 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 ADRA1DP25100 572 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 CXCR5P32302 372 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 ATP1A2P50993 1020 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 PPP1CAP62136 330 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SH3BP2P78314 561 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 LAMB3Q13751 1172 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 GSE1Q14687 1217 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 PLCL1Q15111 1095 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 ZNF658BQ4V348 819 aaPredicted RBP11.18□□□□□ -0.62
SPEN-205ENST00000487496 CACHD1Q5VU97 1274 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 KLHL35Q6PF15 583 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 CACNA2D3Q8IZS8 1091 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 IL22RA1Q8N6P7 574 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 OR13J1Q8NGT2 312 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 MAIP1Q8WWC4 291 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 KLHL6Q8WZ60 621 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 WBP1Q96G27 269 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 COG4Q9H9E3 785 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SEMA5BQ9P283 1151 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SLC2A6Q9UGQ3 507 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 SLC24A2Q9UI40 661 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 RIMKLBQ9ULI2 386 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 PRSS21Q9Y6M0 314 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 COLEC10Q9Y6Z7 277 aa11.18□□□□□ -0.62
SPEN-205ENST00000487496 ATRXP46100 2492 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 OR5K3A6NET4 321 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 STK17BO94768 372 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 AP2A2O94973 939 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 LIFP15018 202 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 PDHA2P29803 388 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 FOXN2P32314 431 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 NSG1P42857 185 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 KCNJ1P48048 391 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 ACVR1Q04771 509 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 FOXM1Q08050 763 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
SPEN-205ENST00000487496 KRT33BQ14525 404 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 ITIH4Q14624 930 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 TSTD2Q5T7W7 516 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 NLRP9Q7RTR0 991 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 TIPARPQ7Z3E1 657 aaKnown RBP11.17□□□□□ -0.62
SPEN-205ENST00000487496 NLGN4XQ8N0W4 816 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 ZSCAN1Q8NBB4 408 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 NLGN4YQ8NFZ3 816 aaPredicted RBP11.17□□□□□ -0.62
SPEN-205ENST00000487496 HDAC10Q969S8 669 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 ZNF778Q96MU6 729 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 OR6C1Q96RD1 312 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 OR52A5Q9H2C5 316 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 KIR3DX1Q9H7L2 352 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 GRPEL1Q9HAV7 217 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 EIF2B3Q9NR50 452 aaKnown RBP11.17□□□□□ -0.62
SPEN-205ENST00000487496 HRASLS2Q9NWW9 162 aa11.17□□□□□ -0.62
SPEN-205ENST00000487496 TMEM184BQ9Y519 407 aaPredicted RBP11.17□□□□□ -0.62
SPEN-205ENST00000487496 LOC400499M0QZD8 3231 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 MGAQ8IWI9 3026 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 IGHV5-51A0A0C4DH38 117 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 C1QL1O75973 258 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 GOT2P00505 430 aaKnown RBP11.16□□□□□ -0.62
SPEN-205ENST00000487496 GSTM1P09488 218 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 NELFEP18615 380 aaKnown RBP11.16□□□□□ -0.62
SPEN-205ENST00000487496 MAP4P27816 1152 aaKnown RBP11.16□□□□□ -0.62
SPEN-205ENST00000487496 NDUFS1P28331 727 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 CD151P48509 253 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 GSTM4Q03013 218 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 RPA4Q13156 261 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 IL11RAQ14626 422 aa11.16□□□□□ -0.62
SPEN-205ENST00000487496 DNTTIP2Q5QJE6 756 aaKnown RBP11.16□□□□□ -0.62
SPEN-205ENST00000487496 AFTPHQ6ULP2 937 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms