RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 VAV2P52735 878 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 RRADP55042 308 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 WNT3AP56704 352 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 DYNLT1P63172 113 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 TPM4P67936 248 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 FANCCQ00597 558 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 MRPL49Q13405 166 aaKnown RBP19.53■□□□□ 0.72
PHF1-208ENST00000486845 NOMO1Q15155 1222 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 EIF2S3LQ2VIR3 472 aaKnown RBP19.53■□□□□ 0.72
PHF1-208ENST00000486845 SIRPB2Q5JXA9 342 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 FNBP1LQ5T0N5 605 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 SLC6A19Q695T7 634 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 DUS1LQ6P1R4 473 aaKnown RBP19.53■□□□□ 0.72
PHF1-208ENST00000486845 KDELC1Q6UW63 502 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 MED25Q71SY5 747 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 B4GALNT4Q76KP1 1039 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 GLT6D1Q7Z4J2 308 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 TMEM102Q8N9M5 508 aaPredicted RBP19.53■□□□□ 0.72
PHF1-208ENST00000486845 GLIS1Q8NBF1 620 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 CLIP3Q96DZ5 547 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 INSM2Q96T92 566 aaPredicted RBP19.53■□□□□ 0.72
PHF1-208ENST00000486845 NUDT9Q9BW91 350 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 PACSIN1Q9BY11 444 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 MFRPQ9BY79 579 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 SMOXQ9NWM0 555 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 LUZP4Q9P127 313 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 PKP3Q9Y446 797 aa19.53■□□□□ 0.72
PHF1-208ENST00000486845 MGAT4DA6NG13 374 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 ZNF185O15231 689 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 SLC35G4P0C7Q5 338 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 HLA-DPA1P20036 260 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 MSH3P20585 1137 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 PRKAA1Q13131 559 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 PRKD1Q15139 912 aaPredicted RBP19.52■□□□□ 0.72
PHF1-208ENST00000486845 ODF2Q5BJF6 829 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 LCN10Q6JVE6 187 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 BZW1Q7L1Q6 419 aaKnown RBP19.52■□□□□ 0.72
PHF1-208ENST00000486845 PRR7Q8TB68 274 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 BLOC1S5Q8TDH9 187 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 TLR10Q9BXR5 811 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 SYTL2Q9HCH5 934 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 GPR83Q9NYM4 423 aa19.52■□□□□ 0.72
PHF1-208ENST00000486845 ENO4A6NNW6 628 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 GYPCP04921 128 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 TMEM253P0C7T8 217 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 PYGMP11217 842 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 NFKB1P19838 968 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 CDH3P22223 829 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 NDUFS1P28331 727 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 CD68P34810 354 aaPredicted RBP19.51■□□□□ 0.71
PHF1-208ENST00000486845 RORAP35398 523 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 CHRNA4P43681 627 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 ARCN1P48444 511 aaKnown RBP19.51■□□□□ 0.71
PHF1-208ENST00000486845 NR2C2P49116 596 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 ITGA1P56199 1179 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 UBASH3AP57075 661 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 ABRQ12979 859 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 SLC18A3Q16572 532 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 FBXO38Q6PIJ6 1188 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 FAM198BQ6UWH4 519 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 MAMDC2Q7Z304 686 aaPredicted RBP19.51■□□□□ 0.71
PHF1-208ENST00000486845 SLC25A41Q8N5S1 370 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 RBMXL3Q8N7X1 1067 aaKnown RBP19.51■□□□□ 0.71
PHF1-208ENST00000486845 OR2L2Q8NH16 312 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 C1GALT1Q9NS00 363 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 POMT2Q9UKY4 750 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 COLEC10Q9Y6Z7 277 aa19.51■□□□□ 0.71
PHF1-208ENST00000486845 CACNA1DQ01668 2161 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 SLC9B1P1A6NJY1 282 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 A6NL46 340 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 MATN2O00339 956 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 GAPDHSO14556 408 aaPredicted RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 POLR2CP19387 275 aaPredicted RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 CYP2A7P20853 494 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 CA5AP35218 305 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 ARHGAP25P42331 645 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 ADCY2Q08462 1091 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 KRT33BQ14525 404 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 LRRC38Q5VT99 294 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 PRAMEF17Q5VTA0 474 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 DET1Q7L5Y6 550 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 RAB43Q86YS6 212 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 SYTL1Q8IYJ3 562 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 ZBTB2Q8N680 514 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 SPDYE1Q8NFV5 336 aaPredicted RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 TFB1MQ8WVM0 346 aaKnown RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 RNF25Q96BH1 459 aaPredicted RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 PPM1MQ96MI6 270 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 SMAD5Q99717 465 aaKnown RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 ACTR5Q9H9F9 607 aaPredicted RBP19.5■□□□□ 0.71
PHF1-208ENST00000486845 PCMTD2Q9NV79 361 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 HEBP2Q9Y5Z4 205 aa19.5■□□□□ 0.71
PHF1-208ENST00000486845 SPTBP11277 2137 aa19.49■□□□□ 0.71
PHF1-208ENST00000486845 TMEM150CB9EJG8 249 aa19.49■□□□□ 0.71
PHF1-208ENST00000486845 MAP3K7O43318 606 aa19.49■□□□□ 0.71
PHF1-208ENST00000486845 BUD23O43709 281 aaKnown RBP19.49■□□□□ 0.71
PHF1-208ENST00000486845 CAPN1P07384 714 aa19.49■□□□□ 0.71
PHF1-208ENST00000486845 MSL3P1P0C860 447 aa19.49■□□□□ 0.71
PHF1-208ENST00000486845 HNRNPH3P31942 346 aaKnown RBP19.49■□□□□ 0.71
PHF1-208ENST00000486845 PREPP48147 710 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms