RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 B3GALT5Q9Y2C3 310 aa4.73□□□□□ -1.65
LMBR1-218ENST00000486837 WBP11Q9Y2W2 641 aaKnown RBP4.73□□□□□ -1.65
LMBR1-218ENST00000486837 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
LMBR1-218ENST00000486837 PCDHGA5Q9Y5G8 931 aa4.73□□□□□ -1.65
LMBR1-218ENST00000486837 GPRASP1Q5JY77 1395 aa4.73□□□□□ -1.65
LMBR1-218ENST00000486837 NINLQ9Y2I6 1382 aa4.73□□□□□ -1.65
LMBR1-218ENST00000486837 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 SYNRGQ9UMZ2 1314 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 GPR75-ASB3A0A0A6YYF3 556 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 ZCWPW2A0A1B0GU75 182 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 DENND3A2RUS2 1198 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 C15orf62A8K5M9 175 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 TMEM189-UBE2V1I3L0A0 370 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 WDR1O75083 606 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 CDH1P12830 882 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 ATP6V1B1P15313 513 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 ITGA2P17301 1181 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PSMA3P25788 255 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 TKTP29401 623 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 IL15P40933 162 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 ISL1P61371 349 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PPP2R2BQ00005 443 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 RUNX1T1Q06455 604 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 COASYQ13057 564 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 TRDNQ13061 729 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 UBE2V1Q13404 147 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PRPF4BQ13523 1007 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 BMP2KLQ5H9B9 411 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 CAPRIN2Q6IMN6 1127 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PLBD1Q6P4A8 553 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 SPSB3Q6PJ21 355 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 HAUS6Q7Z4H7 955 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 LDB1Q86U70 411 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 HSCBQ8IWL3 235 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 NAGSQ8N159 534 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 MUC20Q8N307 709 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 CARNMT1Q8N4J0 409 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 C1orf52Q8N6N3 182 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PHF21AQ96BD5 680 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 FAM84BQ96KN1 310 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 GCNAQ96QF7 691 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PPIL3Q9H2H8 161 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 SLCO5A1Q9H2Y9 848 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 CHMP1AQ9HD42 196 aaPredicted RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 TAS2R14Q9NYV8 317 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 PPIEQ9UNP9 301 aaKnown RBP4.72□□□□□ -1.65
LMBR1-218ENST00000486837 FAM169AQ9Y6X4 670 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 UNC13AQ9UPW8 1703 aa4.72□□□□□ -1.65
LMBR1-218ENST00000486837 OR2M5A3KFT3 312 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 ASPDHA6ND91 283 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 A6NL46 340 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 MAGEB17A8MXT2 336 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 DVL1O14640 695 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 SCG2P13521 617 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 PAX7P23759 505 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 NMBRP28336 390 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 SMC1AQ14683 1233 aaKnown RBP4.71□□□□□ -1.66
LMBR1-218ENST00000486837 TMEM266Q2M3C6 531 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 FAM98BQ52LJ0 330 aaKnown RBP4.71□□□□□ -1.66
LMBR1-218ENST00000486837 IGSF11Q5DX21 431 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 IRAK1BP1Q5VVH5 260 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 ZNF449Q6P9G9 518 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 DNAJB7Q7Z6W7 309 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-218ENST00000486837 RPAINQ86UA6 219 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 POMGNT2Q8NAT1 580 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 KCTD6Q8NC69 237 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 LMO3Q8TAP4 145 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 SORCS1Q8WY21 1168 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 TBC1D31Q96DN5 1066 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 NEK1Q96PY6 1258 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 ABHD1Q96SE0 405 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 TEX13AQ9BXU3 409 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-218ENST00000486837 CSTL1Q9H114 145 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 EVA1AQ9H8M9 152 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 KLHL9Q9P2J3 617 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 YIPF1Q9Y548 306 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 NISCHQ9Y2I1 1504 aa4.71□□□□□ -1.66
LMBR1-218ENST00000486837 BAZ1BQ9UIG0 1483 aaKnown RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 A0A1W2PS18 150 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 C19orf81C9J6K1 198 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 H0YIN7 160 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 EIF3DO15371 548 aaKnown RBP eCLIP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 TPM3P06753 285 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 GM2AP17900 193 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 AHRP35869 848 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 PEX19P40855 299 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 AMPHP49418 695 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 LIG4P49917 911 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 MLLT10P55197 1068 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 GSCP56915 257 aaPredicted RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 SNRPEP62304 92 aaKnown RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 PITX1P78337 314 aaPredicted RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 EEF1A2Q05639 463 aaKnown RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 TROAPQ12815 778 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 DNAJC21Q5F1R6 531 aaKnown RBP4.7□□□□□ -1.66
LMBR1-218ENST00000486837 C1orf141Q5JVX7 400 aa4.7□□□□□ -1.66
LMBR1-218ENST00000486837 OR7E24Q6IFN5 339 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms