RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HEATR9A2RTY3 570 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 GOLGA6L3A6NEY3 463 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 MROH6A6NGR9 719 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 ERI2A8K979 691 aaKnown RBP17.25■□□□□ 0.35
COL6A1-204ENST00000486023 PRLHRP49683 370 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 SEMA5AQ13591 1074 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 ARMC6Q6NXE6 501 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 DTX1Q86Y01 620 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 CACNA2D3Q8IZS8 1091 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 ZSCAN1Q8NBB4 408 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 PHC3Q8NDX5 983 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 NKD1Q969G9 470 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 RMDN2Q96LZ7 410 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 OR6C1Q96RD1 312 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 HRASLS2Q9NWW9 162 aa17.25■□□□□ 0.35
COL6A1-204ENST00000486023 ZFC3H1O60293 1989 aaKnown RBP17.25■□□□□ 0.35
COL6A1-204ENST00000486023 OR6C74A6NCV1 312 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 H7C0S8 307 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 ATXN7O15265 892 aaPredicted RBP17.24■□□□□ 0.35
COL6A1-204ENST00000486023 RAD1O60671 282 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 SUN1O94901 812 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 C9P02748 559 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 ADRA1DP25100 572 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 PREPP48147 710 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 ARL4DP49703 201 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 VPS41P49754 854 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 RHDQ02161 417 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 ZNF449Q6P9G9 518 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 KLHL35Q6PF15 583 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 NAPRTQ6XQN6 538 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 PPHLN1Q8NEY8 458 aaKnown RBP17.24■□□□□ 0.35
COL6A1-204ENST00000486023 OR4E2Q8NGC2 313 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 HM13Q8TCT9 377 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL6A1-204ENST00000486023 MS4A14Q96JA4 679 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 LINC00615Q96LM1 132 aaPredicted RBP17.24■□□□□ 0.35
COL6A1-204ENST00000486023 ZNF778Q96MU6 729 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 COG4Q9H9E3 785 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 VPS37BQ9H9H4 285 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 FBXO8Q9NRD0 319 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 DRG1Q9Y295 367 aaKnown RBP17.24■□□□□ 0.35
COL6A1-204ENST00000486023 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 PRSS21Q9Y6M0 314 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 COLEC10Q9Y6Z7 277 aa17.24■□□□□ 0.35
COL6A1-204ENST00000486023 TRBV5-4A0A0C4DH59 114 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 UBA6A0AVT1 1052 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 GOT2P00505 430 aaKnown RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 ITGB6P18564 788 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 WT1P19544 449 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 PDHA2P29803 388 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 CSE1LP55060 971 aaKnown RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 CRADDP78560 199 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 PRKG2Q13237 762 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 COL9A2Q14055 689 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 LY6DQ14210 128 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 TSTD2Q5T7W7 516 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 RASGRP3Q8IV61 690 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 TEFMQ96QE5 360 aaKnown RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 B3GNT4Q9C0J1 378 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 CHRAC1Q9NRG0 131 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 TTC7AQ9ULT0 858 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-204ENST00000486023 TCAF1Q9Y4C2 921 aa17.23■□□□□ 0.35
COL6A1-204ENST00000486023 AHCTF1Q8WYP5 2266 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 IGLV3-16A0A075B6K0 115 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 IGHV5-51A0A0C4DH38 117 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 KLHL33A6NCF5 533 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ERVH48-1M5A8F1 160 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 OR1I1O60431 355 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 STK17BO94768 372 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 POLR2CP19387 275 aaPredicted RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 PRAMEP78395 509 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 LAMB3Q13751 1172 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 KCNAB1Q14722 419 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 FASTKD1Q53R41 847 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 CAPRIN2Q6IMN6 1127 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 FBXO38Q6PIJ6 1188 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 PCSK4Q6UW60 755 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 XKR5Q6UX68 686 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 OOSP2Q86WS3 158 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 SIDT2Q8NBJ9 832 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 OR13J1Q8NGT2 312 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 OR4L1Q8NH43 312 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ELMO1Q92556 727 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 TTC1Q99614 292 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 NRTNQ99748 197 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 MAP3K3Q99759 626 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 C19orf43Q9BQ61 176 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ARHGAP9Q9BRR9 750 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 AP1M1Q9BXS5 423 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ZNF768Q9H5H4 540 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 SLC24A2Q9UI40 661 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ANAPC5Q9UJX4 755 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 PILRAQ9UKJ1 303 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
COL6A1-204ENST00000486023 PCDHGA4Q9Y5G9 962 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms