RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TRA2AQ13595 282 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNX17-206ENST00000484886 SEMA3AQ14563 771 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 C16orf72Q14CZ0 275 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 SYTL3Q4VX76 610 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 DUS1LQ6P1R4 473 aaKnown RBP18.72■□□□□ 0.59
SNX17-206ENST00000484886 WDR74Q6RFH5 385 aaPredicted RBP18.72■□□□□ 0.59
SNX17-206ENST00000484886 SYT10Q6XYQ8 523 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 JPH3Q8WXH2 748 aaPredicted RBP18.72■□□□□ 0.59
SNX17-206ENST00000484886 ELMO1Q92556 727 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 SGSM3Q96HU1 749 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 SLC46A1Q96NT5 459 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 MARCH4Q9P2E8 410 aaPredicted RBP18.72■□□□□ 0.59
SNX17-206ENST00000484886 RNF14Q9UBS8 474 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 MAD1L1Q9Y6D9 718 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 ASPMQ8IZT6 3477 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 ACACAQ13085 2346 aa18.72■□□□□ 0.59
SNX17-206ENST00000484886 PIKFYVEQ9Y2I7 2098 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 CCDC188H7C350 402 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 IFRD1O00458 451 aaPredicted RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 HGSO14964 777 aaPredicted RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 FANCGO15287 622 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 TLX3O43711 291 aaPredicted RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 NDUFS3O75489 264 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 DXOO77932 396 aaKnown RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 ITGA2BP08514 1039 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 THRAP10827 490 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 ITGB6P18564 788 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 CSTF2P33240 577 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNX17-206ENST00000484886 PTGIRP43119 386 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 PREPP48147 710 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 MAPK10P53779 464 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 PCBP4P57723 403 aaKnown RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 ERVPABLB-1P60509 514 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 BOP1Q14137 746 aaKnown RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 BRD3Q15059 726 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 IZUMO3Q5VZ72 239 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 SYDE1Q6ZW31 735 aaPredicted RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 PLXDC1Q8IUK5 500 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 SLCO2A1Q92959 643 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 NAF1Q96HR8 494 aaKnown RBP18.71■□□□□ 0.59
SNX17-206ENST00000484886 TSSK1BQ9BXA7 367 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 ASCL3Q9NQ33 180 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 HEBP2Q9Y5Z4 205 aa18.71■□□□□ 0.59
SNX17-206ENST00000484886 GOLGA8KD6RF30 607 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 GOLGA8TH3BQL2 631 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 DNALI1O14645 258 aaPredicted RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 RRP8O43159 456 aaKnown RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 ITIH1P19827 911 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 ETF1P62495 437 aaKnown RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 RNASEH2BQ5TBB1 312 aaKnown RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 MRNIPQ6NTE8 343 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 LRRC69Q6ZNQ3 347 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 PCGF5Q86SE9 256 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 SDCCAG8Q86SQ7 713 aaPredicted RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 FAM129CQ86XR2 697 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 NAT8LQ8N9F0 302 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 AGBL5Q8NDL9 886 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 ZNF669Q96BR6 464 aaPredicted RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 PRR11Q96HE9 360 aaPredicted RBP18.7■□□□□ 0.58
SNX17-206ENST00000484886 TGM7Q96PF1 710 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 WDR70Q9NW82 654 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 COLEC10Q9Y6Z7 277 aa18.7■□□□□ 0.58
SNX17-206ENST00000484886 UBA6A0AVT1 1052 aaPredicted RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 MAGEB16A2A368 324 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 LIN7AO14910 233 aaPredicted RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 PFDN6O15212 129 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 PDHA2P29803 388 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 MLLT3P42568 568 aaPredicted RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 CAPZBP47756 277 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 CSE1LP55060 971 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 GFERP55789 205 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 RPA4Q13156 261 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 DHX34Q14147 1143 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 ARMC3Q5W041 872 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 PTRHD1Q6GMV3 140 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 KIAA0930Q6ICG6 404 aaPredicted RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 CAPRIN2Q6IMN6 1127 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 IRGCQ6NXR0 463 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 KLHL35Q6PF15 583 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 IGF2-ASQ6U949 168 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 XKR5Q6UX68 686 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 NAPRTQ6XQN6 538 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 SNIP1Q8TAD8 396 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 RSC1A1Q92681 617 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 FERD3LQ96RJ6 166 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 KRT12Q99456 494 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 TRIM56Q9BRZ2 755 aaKnown RBP18.69■□□□□ 0.58
SNX17-206ENST00000484886 TRIM51Q9BSJ1 452 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 OGFRQ9NZT2 677 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 RPS6KL1Q9Y6S9 549 aa18.69■□□□□ 0.58
SNX17-206ENST00000484886 FAM237BA0A1B0GVD1 139 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 PRMT5O14744 637 aaPredicted RBP18.68■□□□□ 0.58
SNX17-206ENST00000484886 CAPN5O15484 640 aaPredicted RBP18.68■□□□□ 0.58
SNX17-206ENST00000484886 TTI1O43156 1089 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 RASSF9O75901 435 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 NDUFS1P28331 727 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 ETV5P41161 510 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 EIF3BP55884 814 aaKnown RBP18.68■□□□□ 0.58
SNX17-206ENST00000484886 DNAJC21Q5F1R6 531 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms