RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PLCL1Q15111 1095 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PWWP2BQ6NUJ5 590 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 DAAM2Q86T65 1068 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 ACTL9Q8TC94 416 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 COL26A1Q96A83 441 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 C12orf66Q96MD2 445 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 OSBPL8Q9BZF1 889 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF71Q9NQZ8 489 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 HRASLS2Q9NWW9 162 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 SLC24A2Q9UI40 661 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 FKBPLQ9UIM3 349 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 BTRCQ9Y297 605 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 COLEC10Q9Y6Z7 277 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 MKRN2OSH3BPM6 223 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 KATNA1O75449 491 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 TIAF1O95411 115 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 ZBTB11O95625 1053 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 RALBP11234 206 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PBLDP30039 288 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 HADHAP40939 763 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PRLHRP49683 370 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF140P52738 457 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 TUBB4BP68371 445 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 ERV3-1Q14264 604 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 COLEC12Q5KU26 742 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 DENND5AQ6IQ26 1287 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 SNX20Q7Z614 316 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 LRFN5Q96NI6 719 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PANX2Q96RD6 677 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 TWSG1Q9GZX9 223 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 C10orf88Q9H8K7 445 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 FGF21Q9NSA1 209 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 IGLV3-16A0A075B6K0 115 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CDC14CA4D256 554 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 MATN2O00339 956 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 RFPL1O75677 317 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SLC35G4P0C7Q5 338 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 EBLN1P0CF75 366 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 RBP3P10745 1247 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 PSMB4P28070 264 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CETN2P41208 172 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ARL4DP49703 201 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 EIF3EP60228 445 aaKnown RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 LAMB3Q13751 1172 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 UGT8Q16880 541 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 GPR33Q49SQ1 333 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TMTC4Q5T4D3 741 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ARMC6Q6NXE6 501 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CLEC18BQ6UXF7 455 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF517Q6ZMY9 492 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 DET1Q7L5Y6 550 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 LRRC45Q96CN5 670 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF501Q96CX3 271 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 RMDN2Q96LZ7 410 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SPATA13Q96N96 652 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TRIM5Q9C035 493 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SYTL2Q9HCH5 934 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TRBV5-4A0A0C4DH59 114 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 OR6C74A6NCV1 312 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CPNE3O75131 537 aaKnown RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 GSTM1P09488 218 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ITGALP20701 1170 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 PTPN4P29074 926 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 KPNA2P52292 529 aaKnown RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 RWDD2BP57060 319 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 GSTM4Q03013 218 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SEMA5AQ13591 1074 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF658BQ4V348 819 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 DARS2Q6PI48 645 aaKnown RBP11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SYVN1Q86TM6 617 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 NXPE1Q8N323 547 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 THAP4Q8WY91 577 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TBL1YQ9BQ87 522 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 TP53TG5Q9Y2B4 290 aa11.17□□□□□ -0.62
SCFD1-206ENST00000484733 SETXQ7Z333 2677 aaKnown RBP11.16□□□□□ -0.62
SCFD1-206ENST00000484733 PIPSLA2A3N6 862 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 H7C0S8 307 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 KCNN4O15554 427 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 TJP3O95049 919 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 MSL3P1P0C860 447 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 ATP1B2P14415 290 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-206ENST00000484733 PSMA3P25788 255 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms