RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 DCAF12Q5T6F0 453 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 SEL1L2Q5TEA6 688 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 IRGCQ6NXR0 463 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 PRSS42Q7Z5A4 293 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 CFAP206Q8IYR0 622 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 KLHL6Q8WZ60 621 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 EXTL1Q92935 676 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 C12orf66Q96MD2 445 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 COPS8Q99627 209 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 MAP3K3Q99759 626 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 C19orf43Q9BQ61 176 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 FERMT1Q9BQL6 677 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 TSGA10Q9BZW7 698 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 EPB41L1Q9H4G0 881 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 COG4Q9H9E3 785 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 CASS4Q9NQ75 786 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 AKAP7Q9P0M2 348 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-239ENST00000483086 EPHA6Q9UF33 1036 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-239ENST00000483086 SLC24A2Q9UI40 661 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 TMEM184BQ9Y519 407 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-239ENST00000483086 MED13Q9UHV7 2174 aa11.79□□□□□ -0.52
HDLBP-239ENST00000483086 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 TCRBV7S3A2A0A539 114 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 TK2O00142 265 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 OR1I1O60431 355 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 STK17BO94768 372 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 TPBGLP0DKB5 382 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 FOLR1P15328 257 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 VCLP18206 1134 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 MSNP26038 577 aaKnown RBP11.78□□□□□ -0.52
HDLBP-239ENST00000483086 HADHAP40939 763 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 RAB15P59190 212 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 CACHD1Q5VU97 1274 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 TXLNBQ8N3L3 684 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 AVL9Q8NBF6 648 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 PHC3Q8NDX5 983 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 HM13Q8TCT9 377 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 LKAAEAR1Q8TD35 194 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 STYXQ8WUJ0 223 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 ELMO2Q96JJ3 720 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 ZNF514Q96K75 400 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-239ENST00000483086 PPP1R2P1Q96PQ5 205 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 RAB33BQ9H082 229 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 AKIRIN1Q9H9L7 192 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-239ENST00000483086 RAB6BQ9NRW1 208 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 SMARCAL1Q9NZC9 954 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 ZNF148Q9UQR1 794 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
HDLBP-239ENST00000483086 MRPS18BQ9Y676 258 aaKnown RBP11.78□□□□□ -0.52
HDLBP-239ENST00000483086 SPTA1P02549 2419 aa11.77□□□□□ -0.52
HDLBP-239ENST00000483086 OR5K3A6NET4 321 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TERTO14746 1132 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 NKX2-8O15522 239 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 GOT2P00505 430 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 FGGP02679 453 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 CCDC175P0C221 793 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 STIP1P31948 543 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 HALP42357 657 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 KPNA2P52292 529 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 CRADDP78560 199 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 PDE1BQ01064 536 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 ACVR1Q04771 509 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 FOXM1Q08050 763 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 CCNG2Q16589 344 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TBR1Q16650 682 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 GPR33Q49SQ1 333 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TAF1BQ53T94 588 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TSTD2Q5T7W7 516 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TTC27Q6P3X3 843 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TAS2R42Q7RTR8 314 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 LDB1Q86U70 411 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 RBM12BQ8IXT5 1001 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 PRELID2Q8N945 189 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 LSM14AQ8ND56 463 aaKnown RBP11.77□□□□□ -0.53
HDLBP-239ENST00000483086 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 HDAC10Q969S8 669 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 WBP1Q96G27 269 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 SLC41A2Q96JW4 573 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 RUFY1Q96T51 708 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 ASPSCR1Q9BZE9 553 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 KIR3DX1Q9H7L2 352 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 ACSL5Q9ULC5 683 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 COL12A1Q99715 3063 aa11.77□□□□□ -0.53
HDLBP-239ENST00000483086 TNRC6AQ8NDV7 1962 aaKnown RBP11.76□□□□□ -0.53
HDLBP-239ENST00000483086 C17orf113A0A1B0GUU1 675 aa11.76□□□□□ -0.53
HDLBP-239ENST00000483086 OR6C74A6NCV1 312 aa11.76□□□□□ -0.53
HDLBP-239ENST00000483086 BTN3A3O00478 584 aa11.76□□□□□ -0.53
HDLBP-239ENST00000483086 POLR1CO15160 346 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-239ENST00000483086 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms