RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ULK4Q96C45 1275 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 GRAMD1AQ96CP6 724 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 CXorf40BQ96DE9 158 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 DCUN1D1Q96GG9 259 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 PBKQ96KB5 322 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 CAPZA3Q96KX2 299 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 LINC00615Q96LM1 132 aaPredicted RBP11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 C12orf66Q96MD2 445 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 RANBP9Q96S59 729 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 PRORYQ9H606 182 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 COG4Q9H9E3 785 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 THSD1Q9NS62 852 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 TREX1Q9NSU2 369 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 B3GALT1Q9Y5Z6 326 aa11.15□□□□□ -0.62
RAPGEF1-207ENST00000481260 HEATR9A2RTY3 570 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 OR5K4A6NMS3 321 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 PGRMC1O00264 195 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 ZSCAN12O43309 604 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CTIFO43310 598 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 NRDCO43847 1150 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 BANF1O75531 89 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 ABCG1P45844 678 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 SEPHS1P49903 392 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 EPHA4P54764 986 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CSE1LP55060 971 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 GPLD1P80108 840 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 MRPS25P82663 173 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 KCNAB1Q14722 419 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 GPR33Q49SQ1 333 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 ANKS6Q68DC2 871 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 WDR74Q6RFH5 385 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 VRK3Q8IV63 474 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 LSMEM2Q8N112 164 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 KRT222Q8N1A0 295 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 ZNF248Q8NDW4 579 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 OR6P1Q8NGX9 317 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 ANKRD7Q92527 254 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 MFSD3Q96ES6 412 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 PWWP2AQ96N64 755 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 FCRL3Q96P31 734 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CMKLR1Q99788 373 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 CCM2Q9BSQ5 444 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 DDX47Q9H0S4 455 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 OR52A5Q9H2C5 316 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 UCK1Q9HA47 277 aa11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 DNMT3AQ9Y6K1 912 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF1-207ENST00000481260 MN1Q10571 1320 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 KRT87PA6NCN2 255 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TMX2-CTNND1H3BSU7 103 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 RRP8O43159 456 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 KIF5CO60282 957 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PHF2O75151 1096 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 C9P02748 559 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TPBGLP0DKB5 382 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SLC2A4P14672 509 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 ZNF28P17035 718 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 AMD1P17707 334 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 VCLP18206 1134 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TPSB2P20231 275 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PTGIRP43119 386 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 CAPZBP47756 277 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 GNG11P61952 73 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 CXADRP78310 365 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 EIF3IQ13347 325 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TPSAB1Q15661 275 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 DNTTIP2Q5QJE6 756 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 IRGCQ6NXR0 463 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 CCDC137Q6PK04 289 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 AFTPHQ6ULP2 937 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PPHLN1Q8NEY8 458 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 OR4L1Q8NH43 312 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 HM13Q8TCT9 377 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 ACTRT1Q8TDG2 376 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 MAIP1Q8WWC4 291 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SH3KBP1Q96B97 665 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 ELMO2Q96JJ3 720 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 C9orf72Q96LT7 481 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 XKR8Q9H6D3 395 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 POT1Q9NUX5 634 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SIDT1Q9NXL6 827 aaKnown RBP11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SLC39A1Q9NY26 324 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 CIDEBQ9UHD4 219 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 PCDHGA7Q9Y5G6 932 aa11.13□□□□□ -0.63
RAPGEF1-207ENST00000481260 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
RAPGEF1-207ENST00000481260 IGHV5-51A0A0C4DH38 117 aa11.12□□□□□ -0.63
RAPGEF1-207ENST00000481260 HGSO14964 777 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms