RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	CTSL	P07711	333 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	VASP	P50552	380 aa	Predicted RBP	13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	PRAME	P78395	509 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	RALGDS	Q12967	914 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	TAF1A	Q15573	450 aa	Predicted RBP	13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	TGFBI	Q15582	683 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	GDPD4	Q6W3E5	623 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	PLPP6	Q8IY26	295 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	OR4K2	Q8NGD2	314 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	P2RY13	Q9BPV8	354 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	BPIFA1	Q9NP55	256 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	HEBP1	Q9NRV9	189 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	CACNA2D2	Q9NY47	1150 aa		13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	CNOT11	Q9UKZ1	510 aa	Known RBP	13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.93	□□□□□ -0.18
DENND4B-208	ENST00000480340		A0A0J9YYE9	177 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	C2orf81	A6NN90	581 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340		E7ENX8	843 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	TRBC1	P01850	177 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CKMT2	P17540	419 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	IL12RB1	P42701	662 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	WAS	P42768	502 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	NAB1	Q13506	487 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	PTK2B	Q14289	1009 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	FRG1	Q14331	258 aa	Known RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	LYSMD3	Q7Z3D4	306 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	DENND6A	Q8IWF6	608 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	STK40	Q8N2I9	435 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	PNPLA1	Q8N8W4	532 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	SNX31	Q8N9S9	440 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	TRPC4AP	Q8TEL6	797 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	GPR63	Q9BZJ6	419 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	UNK	Q9C0B0	810 aa	Known RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	IL36A	Q9UHA7	158 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CDC14A	Q9UNH5	594 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	AP4S1	Q9Y587	144 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	PCDHGA7	Q9Y5G6	932 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	FADS3	Q9Y5Q0	445 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	GABRB3	P28472	473 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CTH	P32929	405 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	HNF1B	P35680	557 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	NAGLU	P54802	743 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	SEC13	P55735	322 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CTBP1	Q13363	440 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	GRM3	Q14832	879 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	SMAD2	Q15796	467 aa	Known RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CYP2R1	Q6VVX0	501 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	HMGCLL1	Q8TB92	370 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	STYX	Q8WUJ0	223 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	ECHDC3	Q96DC8	303 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	ZNF641	Q96N77	438 aa	Predicted RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	DRC3	Q9H069	523 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	EFCAB1	Q9HAE3	211 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	TBC1D23	Q9NUY8	699 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	MYRF	Q9Y2G1	1151 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	COQ6	Q9Y2Z9	468 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	SNX13	Q9Y5W8	968 aa		13.92	□□□□□ -0.18
DENND4B-208	ENST00000480340	CKAP5	Q14008	2032 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	FUOM	A2VDF0	154 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	TRIM38	O00635	465 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	GNAO1	P09471	354 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	SAT1	P21673	171 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	LPO	P22079	712 aa	Predicted RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	ZNF140	P52738	457 aa	Predicted RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	TFF2	Q03403	129 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	IER5L	Q5T953	404 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	NEPRO	Q6NW34	567 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	NUDT18	Q6ZVK8	323 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	TTC30B	Q8N4P2	665 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	RMND5B	Q96G75	393 aa	Predicted RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	TMEM245	Q9H330	911 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	NOL11	Q9H8H0	719 aa	Known RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	MAGEE1	Q9HCI5	957 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	SELENON	Q9NZV5	590 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	HACD3	Q9P035	362 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	C1orf232	A0A0U1RR37	186 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	EDDM13	A0A1B0GTR0	161 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	PHGDH	O43175	533 aa	Known RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	NARS	O43776	548 aa	Known RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	EPHX1	P07099	455 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	SPR	P35270	261 aa	Predicted RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	PSME3	P61289	254 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	MPP1	Q00013	466 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	C9orf64	Q5T6V5	341 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	ZNF470	Q6ECI4	717 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	TSPAN33	Q86UF1	283 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	FAM47B	Q8NA70	645 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	C12orf43	Q96C57	262 aa	Known RBP	13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	ISOC1	Q96CN7	298 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	EID2B	Q96D98	161 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	ASB9	Q96DX5	294 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	CDKN2AIPNL	Q96HQ2	116 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	OSBPL11	Q9BXB4	747 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	DOLK	Q9UPQ8	538 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	CDYL	Q9Y232	598 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms