RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
HDLBP-238ENST00000479894 LHX9Q9NQ69 397 aa15.3■□□□□ 0.04
HDLBP-238ENST00000479894 MAP10Q9P2G4 905 aa15.3■□□□□ 0.04
HDLBP-238ENST00000479894 CCDC168Q8NDH2 2452 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 HEATR9A2RTY3 570 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 HTRA2O43464 458 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-238ENST00000479894 C9P02748 559 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 FGF5P12034 268 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 NFKB1P19838 968 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CD86P42081 329 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 LMAN1P49257 510 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CCL11P51671 97 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 MAXP61244 160 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 TUBB4BP68371 445 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 SARNPP82979 210 aaKnown RBP15.29■□□□□ 0.04
HDLBP-238ENST00000479894 PYCR3Q53H96 274 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CPZQ66K79 652 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 SLC6A19Q695T7 634 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 ZNF572Q7Z3I7 529 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-238ENST00000479894 SYVN1Q86TM6 617 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 LINC00523Q86TU6 105 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 RASGRP3Q8IV61 690 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 SPATA4Q8NEY3 305 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CCDC110Q8TBZ0 833 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CT55Q8WUE5 264 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 DTD2Q96FN9 168 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 C9orf72Q96LT7 481 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 FSD1LQ9BXM9 530 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 ING2Q9H160 280 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 ACTL8Q9H568 366 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 KLHL3Q9UH77 587 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 G3BP2Q9UN86 482 aaKnown RBP15.29■□□□□ 0.04
HDLBP-238ENST00000479894 PLEKHM1Q9Y4G2 1056 aa15.29■□□□□ 0.04
HDLBP-238ENST00000479894 CTAGE15A4D2H0 777 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 SMAPO00193 183 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 PSMD11O00231 422 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 FANCGO15287 622 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 KRT14P02533 472 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CYP2A6P11509 494 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 SLC2A4P14672 509 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 RGRP47804 291 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 POLD2P49005 469 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CDK16Q00536 496 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 DR1Q01658 176 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 DSC2Q02487 901 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CDK18Q07002 472 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 DPTQ07507 201 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 RAET1GQ6H3X3 334 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CYB5D1Q6P9G0 228 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 USP45Q70EL2 814 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 PCGF5Q86SE9 256 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 SLC9B2Q86UD5 537 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CTAGE6Q86UF2 777 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CBARPQ8N350 705 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 RBMXL3Q8N7X1 1067 aaKnown RBP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 AVL9Q8NBF6 648 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 LRRN4Q8WUT4 740 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 OR6C1Q96RD1 312 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 CEP41Q9BYV8 373 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 UNKQ9C0B0 810 aaKnown RBP15.28■□□□□ 0.04
HDLBP-238ENST00000479894 LRRC40Q9H9A6 602 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 MRFAP1Q9Y605 127 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 AKAP9Q99996 3911 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 FER1L5A0AVI2 2057 aa15.28■□□□□ 0.04
HDLBP-238ENST00000479894 PKDREJQ9NTG1 2253 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.27■□□□□ 0.04
HDLBP-238ENST00000479894 TRBV23OR9-2A0A075B6M9 112 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 ARHGAP10A1A4S6 786 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 ANKUB1A6NFN9 424 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 LILRA5A6NI73 299 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 SPAG6O75602 509 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 PGLSO95336 258 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 CPP00450 1065 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 HLA-DPA1P20036 260 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 PTPN4P29074 926 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 KCNJ1P48048 391 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 NIPAL4Q0D2K0 466 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 NFATC2Q13469 925 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 LAMB3Q13751 1172 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 ELOAQ14241 798 aaKnown RBP15.27■□□□□ 0.04
HDLBP-238ENST00000479894 CNGA3Q16281 694 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 IYDQ6PHW0 289 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 B4GALNT4Q76KP1 1039 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 IQCKQ8N0W5 287 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 BBOF1Q8ND07 529 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 TADA1Q96BN2 335 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 SNRNP40Q96DI7 357 aaKnown RBP15.27■□□□□ 0.04
HDLBP-238ENST00000479894 TDRD1Q9BXT4 1180 aaKnown RBP15.27■□□□□ 0.04
HDLBP-238ENST00000479894 DDX47Q9H0S4 455 aaKnown RBP15.27■□□□□ 0.04
HDLBP-238ENST00000479894 C10orf88Q9H8K7 445 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 LUZP4Q9P127 313 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 LNPEPQ9UIQ6 1025 aa15.27■□□□□ 0.04
HDLBP-238ENST00000479894 PCDHGC4Q9Y5F7 938 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms