RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 AP2A1O95782 977 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 FAM107AO95990 144 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TRBC1P01850 177 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ESR1P03372 595 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 APRTP07741 180 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 MMP2P08253 660 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ZSCAN5DPP0CG00 497 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ETS1P14921 441 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GNSP15586 552 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 CTPS1P17812 591 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ENDOUP21128 410 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 RPL10P27635 214 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 AKT2P31751 481 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ACSL1P33121 698 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 RPL22P35268 128 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 MMP12P39900 470 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ADCY8P40145 1251 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 VPS41P49754 854 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 CCR5P51681 352 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GPR85P60893 370 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 MRPS35P82673 323 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 NFKB2Q00653 900 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TEKQ02763 1124 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 C2orf54Q08AI8 447 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 CDH17Q12864 832 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SEMA5AQ13591 1074 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 CUL3Q13618 768 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PTK6Q13882 451 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GALNT3Q14435 633 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TRIP13Q15645 432 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SLC1A5Q15758 541 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TMEM52BQ4KMG9 183 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 LRRC23Q53EV4 343 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 FAXCQ5TGI0 409 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 LYSMD4Q5XG99 296 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 C8orf74Q6P047 294 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TTC27Q6P3X3 843 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 KDELC1Q6UW63 502 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 DPPA4Q7L190 304 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF572Q7Z3I7 529 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TRIM69Q86WT6 500 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 HORMAD1Q86X24 394 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 RAVER1Q8IY67 606 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SLC25A41Q8N5S1 370 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ARFGAP2Q8N6H7 521 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PRSS33Q8NF86 280 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 B4GALNT2Q8NHY0 566 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PIH1D2Q8WWB5 315 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 NELL1Q92832 810 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SLCO2A1Q92959 643 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 FAM131CQ96AQ9 280 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SKA1Q96BD8 255 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TADA1Q96BN2 335 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SCRN2Q96FV2 425 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 OXNAD1Q96HP4 312 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF419Q96HQ0 510 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 HRASLS5Q96KN8 279 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PTCHD1Q96NR3 888 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TRAPPC9Q96Q05 1148 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 ZFYVE21Q9BQ24 234 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GPR63Q9BZJ6 419 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 MAGEE1Q9HCI5 957 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 EIF2B3Q9NR50 452 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PAPOLBQ9NRJ5 636 aaKnown RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GPR27Q9NS67 375 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 TUBA8Q9NY65 449 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PKD2L2Q9NZM6 624 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 SERGEFQ9UGK8 458 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 GMEB2Q9UKD1 530 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 DMTF1Q9Y222 760 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 INVSQ9Y283 1065 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 C15orf41Q9Y2V0 281 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 PPIL1Q9Y3C6 166 aa6.15□□□□□ -1.42
SF3B1-209ENST00000479532 THADAQ6YHU6 1953 aa6.15□□□□□ -1.43
SF3B1-209ENST00000479532 TTC28Q96AY4 2481 aa6.15□□□□□ -1.43
SF3B1-209ENST00000479532 FANCMQ8IYD8 2048 aa6.15□□□□□ -1.43
SF3B1-209ENST00000479532 CACNA1IQ9P0X4 2223 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 C1orf232A0A0U1RR37 186 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 LOC285095A0A1B0GVY8 99 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PRR5-ARHGAP8B1AHC4 643 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 NDUFAB1O14561 156 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 TTI1O43156 1089 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 FOXD2O60548 495 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 MAGEC1O60732 1142 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 AGTP01019 485 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PYGLP06737 847 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PDHA1P08559 390 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 GSTA2P09210 222 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ALPIP09923 528 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 JMJD7P0C870 316 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 CCDC166P0CW27 439 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 TPSB2P20231 275 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 HNRNPA2B1P22626 353 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 HNF1BP35680 557 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 CDKN1CP49918 316 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 METAP1P53582 386 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 MRPS25P82663 173 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 CALCOCO2Q13137 446 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms