RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 THPOP40225 353 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 RFX2P48378 723 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 GEMIN4P57678 1058 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 ZP1P60852 638 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 KCNJ2P63252 427 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 TUBA1BP68363 451 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 MPP1Q00013 466 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 UBXN1Q04323 297 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 SLC34A1Q06495 639 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 FAM27E3Q08E93 113 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 AP1B1Q10567 949 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 PTP4A2Q12974 167 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 KRT24Q2M2I5 525 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 MCMDC2Q4G0Z9 681 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 SLC9B1Q4ZJI4 515 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 RILPL1Q5EBL4 403 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 GALNT17Q6IS24 598 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 TMEM53Q6P2H8 277 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 B3GNT6Q6ZMB0 384 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 TUBA1AQ71U36 451 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 PATL1Q86TB9 770 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 NELFCDQ8IXH7 590 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 KIAA2013Q8IYS2 634 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 RBFAQ8N0V3 343 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 NUP93Q8N1F7 819 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 C11orf65Q8NCR3 313 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 NAT14Q8WUY8 206 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 UBLCP1Q8WVY7 318 aaPredicted RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 USP6NLQ92738 828 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 SKA1Q96BD8 255 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 EFHD2Q96C19 240 aaPredicted RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 TLCD1Q96CP7 247 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 DGCR14Q96DF8 476 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 KLHL15Q96M94 604 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 RUNDC3BQ96NL0 473 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 GFM1Q96RP9 751 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 ZNF184Q99676 751 aaPredicted RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 HNRNPABQ99729 332 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 TMEM109Q9BVC6 243 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 IFIH1Q9BYX4 1025 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 EDEM3Q9BZQ6 932 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 ROPN1BQ9BZX4 212 aaPredicted RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 DRC3Q9H069 523 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 SH2D4AQ9H788 454 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 ROPN1Q9HAT0 212 aaPredicted RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 FAIMQ9NVQ4 179 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 DDX43Q9NXZ2 648 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 PLK2Q9NYY3 685 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 MPP6Q9NZW5 540 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 CHMP2BQ9UQN3 213 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 NAALADL1Q9UQQ1 740 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 UTP11Q9Y3A2 253 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 SRPRBQ9Y5M8 271 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 PDS5AQ29RF7 1337 aaKnown RBP4.6□□□□□ -1.67
SSR1-207ENST00000479485 NEO1Q92859 1461 aa4.6□□□□□ -1.67
SSR1-207ENST00000479485 MYMKA6NI61 221 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CD8B2A6NJW9 211 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 MS4A18H0YCH9 400 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 IFNL4K9M1U5 179 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 MAPK13O15264 365 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 RGS14O43566 566 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 ATP8B3O60423 1300 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CACNA1FO60840 1977 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 ATP9AO75110 1047 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 SUPT3HO75486 399 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 MTRF1O75570 445 aaKnown RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 PDE5AO76074 875 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 FGFR1OPO95684 399 aaKnown RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 TBX18O95935 607 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 GAS8O95995 478 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 KRT16P08779 473 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 HOXB7P09629 217 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CCDC159P0C7I6 412 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 ZNF8P17098 575 aaPredicted RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 SRD5A1P18405 259 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 GNLYP22749 145 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 EPHA8P29322 1005 aaPredicted RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 PHBP35232 272 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 TCF7P36402 384 aaPredicted RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 MATR3P43243 847 aaKnown RBP eCLIP4.59□□□□□ -1.67
SSR1-207ENST00000479485 RFX5P48382 616 aaPredicted RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 HARS2P49590 506 aaKnown RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 TMED10P49755 219 aaKnown RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 CASP6P55212 293 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CLDN2P57739 230 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CLTCQ00610 1675 aaKnown RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 HNF4GQ14541 408 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 LPIN1Q14693 890 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 VEPH1Q14D04 833 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 KRT31Q15323 416 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 BCL2A1Q16548 175 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 ZCWPW2Q504Y3 356 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 BEND3Q5T5X7 828 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 OTUD1Q5VV17 481 aaPredicted RBP4.59□□□□□ -1.67
SSR1-207ENST00000479485 LRRC8EQ6NSJ5 796 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 CES5AQ6NT32 575 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 ZNF549Q6P9A3 640 aa4.59□□□□□ -1.67
SSR1-207ENST00000479485 PPP1R21Q6ZMI0 780 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms