RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 AGGF1Q8N302 714 aaeCLIP20.05■□□□□ 0.8
VARS-224ENST00000479051 GATA6Q92908 595 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 PANX3Q96QZ0 392 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 TRIM56Q9BRZ2 755 aaKnown RBP20.05■□□□□ 0.8
VARS-224ENST00000479051 FAM167BQ9BTA0 163 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 NRSN2Q9GZP1 204 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 SLC40A1Q9NP59 571 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 ATXN7L1Q9ULK2 861 aaPredicted RBP20.05■□□□□ 0.8
VARS-224ENST00000479051 PCDHB1Q9Y5F3 818 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 MRFAP1Q9Y605 127 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 COLEC10Q9Y6Z7 277 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 H3BMM5 538 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 RPS3P23396 243 aaKnown RBP eCLIP20.04■□□□□ 0.89e-11■■■■■ 30.3
VARS-224ENST00000479051 NDUFS1P28331 727 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 CD1CP29017 333 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 MAPK9P45984 424 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 EIF3BP55884 814 aaKnown RBP20.04■□□□□ 0.8
VARS-224ENST00000479051 SQSTM1Q13501 440 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 BOP1Q14137 746 aaKnown RBP20.04■□□□□ 0.8
VARS-224ENST00000479051 CRYMQ14894 314 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 TMED2Q15363 201 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 UNQ6494/PRO21346Q6UXR6 183 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 CILP2Q8IUL8 1156 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 TMEM159Q96B96 161 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 CARD6Q9BX69 1037 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 INTS10Q9NVR2 710 aaKnown RBP20.04■□□□□ 0.8
VARS-224ENST00000479051 ENTPD2Q9Y5L3 495 aa20.04■□□□□ 0.8
VARS-224ENST00000479051 PIKFYVEQ9Y2I7 2098 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 TRABD2BA6NFA1 517 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 AMD1P17707 334 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CCKBRP32239 447 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CD151P48509 253 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CAV1Q03135 178 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CAMK2BQ13554 666 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 MSS51Q4VC12 460 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 NKAIN2Q5VXU1 208 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 DUPD1Q68J44 220 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CAPRIN2Q6IMN6 1127 aaKnown RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 USP53Q70EK8 1073 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 CENPUQ71F23 418 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 LILRA3Q8N6C8 439 aaPredicted RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 ZFPM2Q8WW38 1151 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 RMDN2Q96LZ7 410 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 INSM2Q96T92 566 aaPredicted RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 TBC1D10AQ9BXI6 508 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 P2RY12Q9H244 342 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 RDH14Q9HBH5 336 aa20.03■□□□□ 0.8
VARS-224ENST00000479051 AKAP7Q9P0M2 348 aaPredicted RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 ZC3H7BQ9UGR2 993 aaKnown RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 CFAP20Q9Y6A4 193 aaKnown RBP20.03■□□□□ 0.8
VARS-224ENST00000479051 UNC13CQ8NB66 2214 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CTAGE15A4D2H0 777 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 TMEM8BA6NDV4 472 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 KPNA5O15131 536 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CASC3O15234 703 aaKnown RBP20.02■□□□□ 0.8
VARS-224ENST00000479051 BANF1O75531 89 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ESR1P03372 595 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 APOA4P06727 396 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CTAGE8P0CG41 777 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ELK3P41970 407 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 PREPP48147 710 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ADARP55265 1226 aaKnown RBP20.02■□□□□ 0.8
VARS-224ENST00000479051 EIF3IQ13347 325 aaKnown RBP20.02■□□□□ 0.8
VARS-224ENST00000479051 GPR18Q14330 331 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 PLCL1Q15111 1095 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ZNF658BQ4V348 819 aaPredicted RBP20.02■□□□□ 0.8
VARS-224ENST00000479051 PHF19Q5T6S3 580 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 KLHL35Q6PF15 583 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CTAGE6Q86UF2 777 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 PDZD3Q86UT5 571 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 KCNMB4Q86W47 210 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CTAGE4Q8IX94 777 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 OR4D9Q8NGE8 314 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 GSDMBQ8TAX9 411 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ASZ1Q8WWH4 475 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 LPGAT1Q92604 370 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 ATXN7L3BQ96GX2 97 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 LIN37Q96GY3 246 aaPredicted RBP20.02■□□□□ 0.8
VARS-224ENST00000479051 NUDT22Q9BRQ3 303 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 FOXP3Q9BZS1 431 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 OR52A5Q9H2C5 316 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CCDC68Q9H2F9 335 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 IL1RAPL1Q9NZN1 696 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CHMP2BQ9UQN3 213 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 AK5Q9Y6K8 562 aa20.02■□□□□ 0.8
VARS-224ENST00000479051 CCDC187A0A096LP49 1063 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 UBXN7O94888 489 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 PROS1P07225 676 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 ITGB6P18564 788 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 PDX1P52945 283 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 PDIA2Q13087 525 aaKnown RBP20.01■□□□□ 0.79
VARS-224ENST00000479051 BRD3Q15059 726 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 TMEM71Q6P5X7 295 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 WDR74Q6RFH5 385 aaPredicted RBP20.01■□□□□ 0.79
VARS-224ENST00000479051 B3GNT8Q7Z7M8 397 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 PLXDC1Q8IUK5 500 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 SPDYE1Q8NFV5 336 aaPredicted RBP20.01■□□□□ 0.79
VARS-224ENST00000479051 WDR36Q8NI36 951 aaKnown RBP20.01■□□□□ 0.79
VARS-224ENST00000479051 NCSTNQ92542 709 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 CFAP36Q96G28 342 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms