RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ZNF501Q96CX3 271 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 PPM1MQ96MI6 270 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 GPR87Q9BY21 358 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 RSPH14Q9UHP6 348 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 SLC24A2Q9UI40 661 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 TRHDEQ9UKU6 1024 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 MAN2B2Q9Y2E5 1009 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 FER1L5A0AVI2 2057 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 CCDC88CQ9P219 2028 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 UBA6A0AVT1 1052 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-208ENST00000478111 AGAP14A8MT82 685 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 PRAMEF1O95521 474 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 MSH3P20585 1137 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 RBL1P28749 1068 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 PTPN4P29074 926 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 ADRA1AP35348 466 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 TNNT3P45378 269 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-208ENST00000478111 TUBB4BP68371 445 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 XIAPP98170 497 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 GPS2Q13227 327 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 TUBB2AQ13885 445 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 GPR19Q15760 415 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 UGT8Q16880 541 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 LONRF2Q1L5Z9 754 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 BCL7AQ4VC05 210 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
TRIM13-208ENST00000478111 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 BBS12Q6ZW61 710 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 LILRA3Q8N6C8 439 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-208ENST00000478111 OR4K2Q8NGD2 314 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 KRT35Q92764 455 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 LINC00615Q96LM1 132 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-208ENST00000478111 C12orf66Q96MD2 445 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 TUBB2BQ9BVA1 445 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 FICDQ9BVA6 458 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 GBA3Q9H227 469 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 KIR3DX1Q9H7L2 352 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 FKBPLQ9UIM3 349 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 ACSL5Q9ULC5 683 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
TRIM13-208ENST00000478111 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 SRP72O76094 671 aaKnown RBP16.28■□□□□ 0.2
TRIM13-208ENST00000478111 TPM1P09493 284 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-208ENST00000478111 AKT1P31749 480 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 MAGEA1P43355 309 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 KPNA2P52292 529 aaKnown RBP16.28■□□□□ 0.2
TRIM13-208ENST00000478111 IL10RAQ13651 578 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 TAF1AQ15573 450 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-208ENST00000478111 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 CNGA4Q8IV77 575 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 HEMGNQ9BXL5 484 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 FSD1LQ9BXM9 530 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 ASB8Q9H765 288 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 MLXIPLQ9NP71 852 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 KCND1Q9NSA2 647 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 FARSAQ9Y285 508 aaKnown RBP16.28■□□□□ 0.2
TRIM13-208ENST00000478111 BTRCQ9Y297 605 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 ESPL1Q14674 2120 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 HIVEP3Q5T1R4 2406 aa16.28■□□□□ 0.2
TRIM13-208ENST00000478111 NOTCH2Q04721 2471 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 KLHL33A6NCF5 533 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 AKR1B15C9JRZ8 316 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-208ENST00000478111 APOC4-APOC2K7ER74 178 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 CPNE3O75131 537 aaKnown RBP16.27■□□□□ 0.2
TRIM13-208ENST00000478111 SCRG1O75711 98 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 LCA5LO95447 670 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-208ENST00000478111 APOC2P02655 101 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 ARCN1P48444 511 aaKnown RBP16.27■□□□□ 0.2
TRIM13-208ENST00000478111 ARL4DP49703 201 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 GEMP55040 296 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 CPZQ66K79 652 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 LCN10Q6JVE6 187 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 SYVN1Q86TM6 617 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 CARFQ8N187 725 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 THAP4Q8WY91 577 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 SEC14L1Q92503 715 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 PSMG3-AS1Q96PY0 264 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 APOL2Q9BQE5 337 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 FAM8A1Q9UBU6 413 aa16.27■□□□□ 0.2
TRIM13-208ENST00000478111 SNRNP200O75643 2136 aaKnown RBP16.27■□□□□ 0.19
TRIM13-208ENST00000478111 PCSK5Q92824 1860 aa16.27■□□□□ 0.19
TRIM13-208ENST00000478111 ITPR2Q14571 2701 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 C2orf81A6NN90 581 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 ANXA9O76027 345 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 POLBP06746 335 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 GP1BBP13224 206 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 POLR2CP19387 275 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-208ENST00000478111 RPS15P62841 145 aaKnown RBP16.26■□□□□ 0.19
TRIM13-208ENST00000478111 CHAF1BQ13112 559 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-208ENST00000478111 PLEKHS1Q5SXH7 462 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 IZUMO3Q5VZ72 239 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 DENND5AQ6IQ26 1287 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms