RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SLC22A3O75751 556 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 TYRP14679 529 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 SLC7A1P30825 629 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 SPINT3P49223 89 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 GRM2Q14416 872 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 ZDHHC20Q5W0Z9 365 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 SULT1C3Q6IMI6 304 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 CAPRIN2Q6IMN6 1127 aaKnown RBP11.3□□□□□ -0.6
NUP188-205ENST00000477069 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
NUP188-205ENST00000477069 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
NUP188-205ENST00000477069 ICA1LQ8NDH6 482 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 CATSPER1Q8NEC5 780 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 PROKR1Q8TCW9 393 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 ZUFSPQ96AP4 578 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 TMEM125Q96AQ2 219 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 MRGPRX3Q96LB0 322 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 C1orf50Q9BV19 199 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 TRIM54Q9BYV2 358 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 KCTD5Q9NXV2 234 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 B4GALT6Q9UBX8 382 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 MBD1Q9UIS9 605 aaPredicted RBP11.3□□□□□ -0.6
NUP188-205ENST00000477069 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
NUP188-205ENST00000477069 AP4S1Q9Y587 144 aa11.3□□□□□ -0.6
NUP188-205ENST00000477069 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 TSPAN11A1L157 253 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 GUCA1CO95843 209 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 FGBP02675 491 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 HOXA9P31269 272 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 CCR7P32248 378 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 BMPR1AP36894 532 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 FOLH1Q04609 750 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 EMX2Q04743 252 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
NUP188-205ENST00000477069 ABRAXAS2Q15018 415 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 RPS6KA2Q15349 733 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 PAGE3Q5JUK9 113 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ZFAND4Q86XD8 727 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 FRS2Q8WU20 508 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 VCXQ9H320 206 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 IL1RL2Q9HB29 575 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 SMOXQ9NWM0 555 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 CHD7Q9P2D1 2997 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 EIF3FO00303 357 aaPredicted RBP11.29□□□□□ -0.6
NUP188-205ENST00000477069 BNIP3LO60238 219 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 MSH3P20585 1137 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 POLR2JP52435 117 aaKnown RBP11.29□□□□□ -0.6
NUP188-205ENST00000477069 KCNK10P57789 538 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 MED21Q13503 144 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 IL27RAQ6UWB1 636 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 UGT2A3Q6UWM9 527 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 GDPD4Q6W3E5 623 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 DHFR2Q86XF0 187 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 MARVELD2Q8N4S9 558 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 PAF1Q8N7H5 531 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 FNDC5Q8NAU1 212 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 PHC3Q8NDX5 983 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 OR2T34Q8NGX1 318 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 OR2T3Q8NH03 318 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 POF1BQ8WVV4 589 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 VPS33AQ96AX1 596 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ULK4Q96C45 1275 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 COPS8Q99627 209 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ERVW-1Q9UQF0 538 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 AP1G1O43747 822 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 SYNCRIPO60506 623 aaKnown RBP11.29□□□□□ -0.6
NUP188-205ENST00000477069 EPORP19235 508 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 AOAHP28039 575 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 CAMK1Q14012 370 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 TTLL9Q3SXZ7 439 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 LCN8Q6JVE9 175 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 HMBOX1Q6NT76 420 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 CYP2R1Q6VVX0 501 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ZNF557Q8N988 423 aaPredicted RBP11.29□□□□□ -0.6
NUP188-205ENST00000477069 MYLIPQ8WY64 445 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 RAD9AQ99638 391 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 NTMT1Q9BV86 223 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 APOL5Q9BWW9 433 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 ARMC1Q9NVT9 282 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 NEUROG3Q9Y4Z2 214 aa11.29□□□□□ -0.6
NUP188-205ENST00000477069 K7EPI3 171 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 CSPG5O95196 566 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 CTNNB1P35222 781 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 GGT5P36269 586 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms