RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 WNT16Q9UBV4 365 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 PROB1E7EW31 1015 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 IPO8O15397 1037 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 WDR1O75083 606 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 FDPSP14324 419 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 GM2AP17900 193 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 SCP2P22307 547 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 CDC25AP30304 524 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 PCGF2P35227 344 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 POLGP54098 1239 aaPredicted RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 SEC61A1P61619 476 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 RBPJQ06330 500 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 KIF5AQ12840 1032 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 HSPB3Q12988 150 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 DGLUCYQ7Z3D6 616 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 GBGT1Q8N5D6 347 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 ZNF441Q8N8Z8 693 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 MOSPD2Q8NHP6 518 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 GOT1L1Q8NHS2 421 aaPredicted RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 SMG7Q92540 1137 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 PHF21AQ96BD5 680 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 SPDL1Q96EA4 605 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 ZNF385AQ96PM9 386 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 RAB3IPQ96QF0 476 aaPredicted RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 NTPCRQ9BSD7 190 aaKnown RBP5.71□□□□□ -1.5
VPS50-212ENST00000476413 SEZ6LQ9BYH1 1024 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 WNT5BQ9H1J7 359 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 DLGAP4Q9Y2H0 992 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 YIPF1Q9Y548 306 aa5.71□□□□□ -1.5
VPS50-212ENST00000476413 A0A0G2JPF8 293 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 TEX13DA0A0J9YY54 714 aaPredicted RBP5.7□□□□□ -1.5
VPS50-212ENST00000476413 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 CTAGE9A4FU28 777 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 C4orf47A7E2U8 309 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 HNRNPCL3B7ZW38 293 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 EIF3DO15371 548 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS50-212ENST00000476413 ZNHIT1O43257 154 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 PENKP01210 267 aaPredicted RBP5.7□□□□□ -1.5
VPS50-212ENST00000476413 OR2T7P0C7T2 308 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 CTAGE8P0CG41 777 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 HNRNPCL4P0DMR1 293 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 POLR2CP19387 275 aaPredicted RBP5.7□□□□□ -1.5
VPS50-212ENST00000476413 TLX1P31314 330 aaPredicted RBP5.7□□□□□ -1.5
VPS50-212ENST00000476413 PEX5P50542 639 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 LIMK1P53667 647 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 LTBQ06643 244 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 BFSP1Q12934 665 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 PRKAA1Q13131 559 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 PLA2G4FQ68DD2 849 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 CAVIN1Q6NZI2 390 aaKnown RBP5.7□□□□□ -1.5
VPS50-212ENST00000476413 CTAGE4Q8IX94 777 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 OR8H3Q8N146 312 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 IQCF1Q8N6M8 205 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 PPP4R1Q8TF05 950 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 TMEM255BQ8WV15 326 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 FIG4Q92562 907 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 NEUROG1Q92886 237 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 ZNF479Q96JC4 524 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 MUS81Q96NY9 551 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 ZWILCHQ9H900 591 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 MYNNQ9NPC7 610 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 TCP11L1Q9NUJ3 509 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 SLC24A2Q9UI40 661 aa5.7□□□□□ -1.5
VPS50-212ENST00000476413 TRIP12Q14669 1992 aaPredicted RBP5.69□□□□□ -1.5
VPS50-212ENST00000476413 MYMKA6NI61 221 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 ANKRD66B4E2M5 251 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 SLC7A4O43246 635 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 PPP1R3DO95685 299 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 LDLRP01130 860 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 RAB40ALP0C0E4 278 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 CDK4P11802 303 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 MPZP25189 248 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 USP8P40818 1118 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 KCNJ4P48050 445 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 ARCN1P48444 511 aaKnown RBP5.69□□□□□ -1.5
VPS50-212ENST00000476413 MMP15P51511 669 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 PLIN5Q00G26 463 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 GTF2H2Q13888 395 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 SF3B4Q15427 424 aaKnown RBP eCLIP5.69□□□□□ -1.52e-7■■□□□ 14.3
VPS50-212ENST00000476413 TMEM35AQ53FP2 167 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 LRCH2Q5VUJ6 765 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 GTF2H2CQ6P1K8 395 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 PLXDC2Q6UX71 529 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 PPP1R21Q6ZMI0 780 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 METTL23Q86XA0 190 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 CCAR2Q8N163 923 aaKnown RBP5.69□□□□□ -1.5
VPS50-212ENST00000476413 LILRB1Q8NHL6 650 aaPredicted RBP5.69□□□□□ -1.5
VPS50-212ENST00000476413 SEMA4DQ92854 862 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 SLX1AQ9BQ83 275 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 FNDC11Q9BVV2 318 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 KLHL1Q9NR64 748 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 MIOSQ9NXC5 875 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 NME7Q9Y5B8 376 aa5.69□□□□□ -1.5
VPS50-212ENST00000476413 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 H0Y626 953 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 CLIC2O15247 247 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 BUD23O43709 281 aaKnown RBP5.68□□□□□ -1.5
VPS50-212ENST00000476413 GPR137BO60478 399 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms